Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 HRK1YOR267C 2280 nt5.56□□□□□ -1.52
TY1B-HO13535 AHP1YLR109W 531 nt5.55□□□□□ -1.52
TY1B-HO13535 PIM1YBL022C 3402 nt5.55□□□□□ -1.52
TY1B-HO13535 PHO90YJL198W 2646 nt5.55□□□□□ -1.52
TY1B-HO13535 MCM7YBR202W 2538 nt5.55□□□□□ -1.52
TY1B-HO13535 FDH1YOR388C 1131 nt5.55□□□□□ -1.52
TY1B-HO13535 FDH2YPL275W 711 nt5.55□□□□□ -1.52
TY1B-HO13535 PTM1YKL039W 1572 nt5.54□□□□□ -1.52
TY1B-HO13535 ADP1YCR011C 3150 nt5.54□□□□□ -1.52
TY1B-HO13535 RNR1YER070W 2667 nt5.54□□□□□ -1.52
TY1B-HO13535 DTD1YDL219W 453 nt5.54□□□□□ -1.52
TY1B-HO13535 YLR012CYLR012C 300 nt5.54□□□□□ -1.52
TY1B-HO13535 DSF2YBR007C 2211 nt5.54□□□□□ -1.52
TY1B-HO13535 FLC3YGL139W 2409 nt5.53□□□□□ -1.52
TY1B-HO13535 TFC6YDR362C 2019 nt5.53□□□□□ -1.52
TY1B-HO13535 SUB2YDL084W 1341 nt5.53□□□□□ -1.52
TY1B-HO13535 ACE2YLR131C 2313 nt5.53□□□□□ -1.52
TY1B-HO13535 FLO5YHR211W 3228 nt5.53□□□□□ -1.52
TY1B-HO13535 FAA1YOR317W 2103 nt5.53□□□□□ -1.52
TY1B-HO13535 YEL057CYEL057C 702 nt5.52□□□□□ -1.53
TY1B-HO13535 IRC25YLR021W 540 nt5.52□□□□□ -1.53
TY1B-HO13535 RPA43YOR340C 981 nt5.52□□□□□ -1.53
TY1B-HO13535 MSC7YHR039C 1935 nt5.52□□□□□ -1.53
TY1B-HO13535 JIP4YDR475C 2631 nt5.52□□□□□ -1.53
TY1B-HO13535 IDS2YJL146W 1410 nt5.52□□□□□ -1.53
TY1B-HO13535 YPL216WYPL216W 3309 nt5.52□□□□□ -1.53
TY1B-HO13535 KAP114YGL241W 3015 nt5.52□□□□□ -1.53
TY1B-HO13535 YNL095CYNL095C 1929 nt5.52□□□□□ -1.53
TY1B-HO13535 GAL4YPL248C 2646 nt5.52□□□□□ -1.53
TY1B-HO13535 MSD1YPL104W 1977 nt5.51□□□□□ -1.53
TY1B-HO13535 RPN2YIL075C 2838 nt5.51□□□□□ -1.53
TY1B-HO13535 ACK1YDL203C 1872 nt5.5□□□□□ -1.53
TY1B-HO13535 YDL094CYDL094C 510 nt5.5□□□□□ -1.53
TY1B-HO13535 PDR16YNL231C 1056 nt5.5□□□□□ -1.53
TY1B-HO13535 TMA19YKL056C 504 nt5.5□□□□□ -1.53
TY1B-HO13535 SIP5YMR140W 1470 nt5.49□□□□□ -1.53
TY1B-HO13535 GTF1YGR102C 552 nt5.49□□□□□ -1.53
TY1B-HO13535 SNF2YOR290C 5112 nt5.49□□□□□ -1.53
TY1B-HO13535 PEX19YDL065C 1029 nt5.48□□□□□ -1.53
TY1B-HO13535 CWC27YPL064C 906 nt5.48□□□□□ -1.53
TY1B-HO13535 CKS1YBR135W 453 nt5.48□□□□□ -1.53
TY1B-HO13535 RSC1YGR056W 2787 nt5.48□□□□□ -1.53
TY1B-HO13535 SVF1YDR346C 1446 nt5.47□□□□□ -1.53
TY1B-HO13535 TEF4YKL081W 1239 nt5.47□□□□□ -1.53
TY1B-HO13535 PEX29YDR479C 1665 nt5.46□□□□□ -1.54
TY1B-HO13535 PHO86YJL117W 936 nt5.46□□□□□ -1.54
TY1B-HO13535 YPP1YGR198W 2454 nt5.46□□□□□ -1.54
TY1B-HO13535 OAF1YAL051W 3144 nt5.46□□□□□ -1.54
TY1B-HO13535 SRP101YDR292C 1866 nt5.46□□□□□ -1.54
TY1B-HO13535 EIS1YMR031C 2532 nt5.46□□□□□ -1.54
TY1B-HO13535 HIM1YDR317W 1245 nt5.45□□□□□ -1.54
TY1B-HO13535 ADD66YKL206C 804 nt5.45□□□□□ -1.54
TY1B-HO13535 BUD14YAR014C 2130 nt5.45□□□□□ -1.54
TY1B-HO13535 YCL021W-AYCL021W-A 378 nt5.45□□□□□ -1.54
TY1B-HO13535 PKH1YDR490C 2301 nt5.45□□□□□ -1.54
TY1B-HO13535 MGM101YJR144W 810 nt5.44□□□□□ -1.54
TY1B-HO13535 MAP1YLR244C 1164 nt5.44□□□□□ -1.54
TY1B-HO13535 CYK3YDL117W 2658 nt5.44□□□□□ -1.54
TY1B-HO13535 YCF1YDR135C 4548 nt5.44□□□□□ -1.54
TY1B-HO13535 SHQ1YIL104C 1524 nt5.44□□□□□ -1.54
TY1B-HO13535 YFR035CYFR035C 345 nt5.44□□□□□ -1.54
TY1B-HO13535 TCB3YML072C 4638 nt5.43□□□□□ -1.54
TY1B-HO13535 TDA7YNL176C 1911 nt5.43□□□□□ -1.54
TY1B-HO13535 ARN2YHL047C 1863 nt5.43□□□□□ -1.54
TY1B-HO13535 TRX3YCR083W 384 nt5.43□□□□□ -1.54
TY1B-HO13535 SYT1YPR095C 3681 nt5.43□□□□□ -1.54
TY1B-HO13535 OCA5YHL029C 2040 nt5.43□□□□□ -1.54
TY1B-HO13535 YGL218WYGL218W 651 nt5.42□□□□□ -1.54
TY1B-HO13535 RPL15AYLR029C 615 nt5.42□□□□□ -1.54
TY1B-HO13535 SIT1YEL065W 1887 nt5.42□□□□□ -1.54
TY1B-HO13535 PTA1YAL043C 2358 nt5.42□□□□□ -1.54
TY1B-HO13535 VPS73YGL104C 1461 nt5.42□□□□□ -1.54
TY1B-HO13535 RRP17YDR412W 708 nt5.42□□□□□ -1.54
TY1B-HO13535 PWR1PWR1 941 nt5.42□□□□□ -1.54
TY1B-HO13535 MDM1YML104C 3384 nt5.41□□□□□ -1.54
TY1B-HO13535 ALR2YFL050C 2577 nt5.41□□□□□ -1.54
TY1B-HO13535 NSA2YER126C 786 nt5.41□□□□□ -1.54
TY1B-HO13535 tV(CAC)DtV(CAC)D 73 nt5.41□□□□□ -1.54
TY1B-HO13535 tV(CAC)HtV(CAC)H 73 nt5.41□□□□□ -1.54
TY1B-HO13535 POL3YDL102W 3294 nt5.4□□□□□ -1.54
TY1B-HO13535 NPY1YGL067W 1155 nt5.4□□□□□ -1.54
TY1B-HO13535 RPB3YIL021W 957 nt5.4□□□□□ -1.54
TY1B-HO13535 VAC8YEL013W 1737 nt5.4□□□□□ -1.55
TY1B-HO13535 YTM1YOR272W 1383 nt5.4□□□□□ -1.55
TY1B-HO13535 MRPL51YPR100W 423 nt5.39□□□□□ -1.55
TY1B-HO13535 SLI1YGR212W 1407 nt5.39□□□□□ -1.55
TY1B-HO13535 APC1YNL172W 5247 nt5.38□□□□□ -1.55
TY1B-HO13535 ERJ5YFR041C 888 nt5.38□□□□□ -1.55
TY1B-HO13535 YNR063WYNR063W 1824 nt5.38□□□□□ -1.55
TY1B-HO13535 APE1YKL103C 1545 nt5.37□□□□□ -1.55
TY1B-HO13535 AKR1YDR264C 2295 nt5.37□□□□□ -1.55
TY1B-HO13535 ARC15YIL062C 465 nt5.37□□□□□ -1.55
TY1B-HO13535 CPR6YLR216C 1116 nt5.37□□□□□ -1.55
TY1B-HO13535 YMR316C-AYMR316C-A 312 nt5.37□□□□□ -1.55
TY1B-HO13535 DIP2YLR129W 2832 nt5.37□□□□□ -1.55
TY1B-HO13535 YFR006WYFR006W 1608 nt5.37□□□□□ -1.55
TY1B-HO13535 IRS4YKR019C 1848 nt5.37□□□□□ -1.55
TY1B-HO13535 UBX5YDR330W 1503 nt5.37□□□□□ -1.55
TY1B-HO13535 YCL075WYCL075W 441 nt5.37□□□□□ -1.55
TY1B-HO13535 MDY2YOL111C 639 nt5.37□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 100.3 ms