Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
PCDHA13Q9Y5I0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA13Q9Y5I0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA13Q9Y5I0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHA13Q9Y5I0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA13Q9Y5I0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA13Q9Y5I0 AC137767.1-201ENST00000602918 1920 ntBASIC23.96■■□□□ 1.43
PCDHA13Q9Y5I0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
PCDHA13Q9Y5I0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHA13Q9Y5I0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 AL353803.4-201ENST00000565882 1934 ntBASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 AC004448.1-201ENST00000458332 883 ntBASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA13Q9Y5I0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 KRT18P24-201ENST00000344739 1156 ntBASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 MIR4281-201ENST00000580852 62 ntBASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA13Q9Y5I0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA13Q9Y5I0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 PVT1_1.1-201ENST00000615125 194 ntBASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA13Q9Y5I0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 THA1P-201ENST00000590384 1145 ntBASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 BHLHE23-202ENST00000612929 1109 ntBASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHA13Q9Y5I0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 NTF6A-201ENST00000591175 560 ntBASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PCDHA13Q9Y5I0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.89■■□□□ 1.42
PCDHA13Q9Y5I0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.89■■□□□ 1.42
PCDHA13Q9Y5I0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA13Q9Y5I0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
PCDHA13Q9Y5I0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA13Q9Y5I0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA13Q9Y5I0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA13Q9Y5I0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHA13Q9Y5I0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA13Q9Y5I0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA13Q9Y5I0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHA13Q9Y5I0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms