Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.57■■□□□ 1.04
KRT78Q8N1N4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.57■■□□□ 1.04
KRT78Q8N1N4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT78Q8N1N4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.57■■□□□ 1.04
KRT78Q8N1N4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.57■■□□□ 1.04
KRT78Q8N1N4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.57■■□□□ 1.04
KRT78Q8N1N4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.57■■□□□ 1.04
KRT78Q8N1N4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT78Q8N1N4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KRT78Q8N1N4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 AC144652.1-201ENST00000609974 1624 ntBASIC21.56■■□□□ 1.04
KRT78Q8N1N4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.56■■□□□ 1.04
KRT78Q8N1N4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRT78Q8N1N4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
KRT78Q8N1N4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRT78Q8N1N4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KRT78Q8N1N4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
KRT78Q8N1N4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRT78Q8N1N4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRT78Q8N1N4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRT78Q8N1N4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 AL356740.2-201ENST00000601559 647 ntBASIC21.54■■□□□ 1.04
KRT78Q8N1N4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 AC009102.2-201ENST00000606772 1639 ntBASIC21.54■■□□□ 1.04
KRT78Q8N1N4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
KRT78Q8N1N4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
KRT78Q8N1N4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 FP325331.1-202ENST00000623531 1380 ntBASIC21.52■■□□□ 1.04
KRT78Q8N1N4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 AL356441.2-201ENST00000443009 864 ntBASIC21.52■■□□□ 1.04
KRT78Q8N1N4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRT78Q8N1N4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
KRT78Q8N1N4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
KRT78Q8N1N4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.52■■□□□ 1.03
KRT78Q8N1N4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT78Q8N1N4 AL353803.4-201ENST00000565882 1934 ntBASIC21.51■■□□□ 1.03
KRT78Q8N1N4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.51■■□□□ 1.03
KRT78Q8N1N4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT78Q8N1N4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT78Q8N1N4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.51■■□□□ 1.03
KRT78Q8N1N4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT78Q8N1N4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT78Q8N1N4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT78Q8N1N4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.5■■□□□ 1.03
KRT78Q8N1N4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT78Q8N1N4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT78Q8N1N4 AL117332.1-201ENST00000622628 974 ntBASIC21.5■■□□□ 1.03
KRT78Q8N1N4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT78Q8N1N4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT78Q8N1N4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT78Q8N1N4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT78Q8N1N4 LINC01529-204ENST00000636474 1715 ntBASIC21.49■■□□□ 1.03
KRT78Q8N1N4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT78Q8N1N4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT78Q8N1N4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KRT78Q8N1N4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
KRT78Q8N1N4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT78Q8N1N4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms