Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 tG(GCC)G2tG(GCC)G2 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)J1tG(GCC)J1 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 SUF23tG(GCC)J2 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)MtG(GCC)M 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)O1tG(GCC)O1 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 SUF17tG(GCC)O2 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)P1tG(GCC)P1 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 tG(GCC)P2tG(GCC)P2 71 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 GLE2YER107C 1098 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 YGL109WYGL109W 324 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 YGR042WYGR042W 816 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 ERG9YHR190W 1335 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 LNP1YHR192W 837 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 YIL163CYIL163C 354 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 MNN11YJL183W 1269 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 MSC3YLR219W 2187 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 MAP2YBL091C 1266 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 VPS5YOR069W 2028 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 KTR1YOR099W 1182 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 DGA1YOR245C 1257 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 ERV2YPR037C 591 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 YBR113WYBR113W 483 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 THI2YBR240C 1353 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 SDH8YBR269C 417 nt5.61□□□□□ -1.51
TY1A-PR3Q6Q5H1 RGP1YDR137W 1992 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 UBC9YDL064W 474 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 YDL177CYDL177C 513 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 PAU5YFL020C 369 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 PGD1YGL025C 1194 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 YIL082WYIL082W 873 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 AIM20YIL158W 615 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 DCN1YLR128W 810 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 YMR099CYMR099C 894 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 PET123YOR158W 957 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 SPC29YPL124W 762 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 DPM1YPR183W 804 nt5.6□□□□□ -1.51
TY1A-PR3Q6Q5H1 MEC3YLR288C 1425 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 SLU7YDR088C 1149 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 MST27YGL051W 705 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 TAN1YGL232W 870 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 YJL213WYJL213W 996 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 CCP1YKR066C 1086 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 MST28YAR033W 705 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 YHC1YLR298C 696 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 YLR444CYLR444C 303 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 TSA1YML028W 591 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 RRG7YOR305W 729 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 POP7YBR167C 423 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 SMF1YOL122C 1728 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 YOL036WYOL036W 2286 nt5.59□□□□□ -1.51
TY1A-PR3Q6Q5H1 STT3YGL022W 2157 nt5.59□□□□□ -1.52
TY1A-PR3Q6Q5H1 FMP40YPL222W 2067 nt5.59□□□□□ -1.52
TY1A-PR3Q6Q5H1 NFS1YCL017C 1494 nt5.58□□□□□ -1.52
TY1A-PR3Q6Q5H1 DIA3YDL024C 1407 nt5.58□□□□□ -1.52
TY1A-PR3Q6Q5H1 YDR210W-AYDR210W-A 1317 nt5.58□□□□□ -1.52
TY1A-PR3Q6Q5H1 YCR085WYCR085W 354 nt5.58□□□□□ -1.52
TY1A-PR3Q6Q5H1 ARF3YOR094W 552 nt5.58□□□□□ -1.52
TY1A-PR3Q6Q5H1 YJL163CYJL163C 1668 nt5.58□□□□□ -1.52
TY1A-PR3Q6Q5H1 PTK2YJR059W 2457 nt5.58□□□□□ -1.52
TY1A-PR3Q6Q5H1 VNX1YNL321W 2727 nt5.58□□□□□ -1.52
TY1A-PR3Q6Q5H1 CLB1YGR108W 1416 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 RGL1YPL066W 1440 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 YGL176CYGL176C 1665 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 DPH2YKL191W 1605 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 HED1YDR014W-A 489 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 YGR109W-AYGR109W-A 873 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 YJR141WYJR141W 1044 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 MRPL13YKR006C 795 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 YLR217WYLR217W 324 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 RPL31BYLR406C 342 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 YOX1YML027W 1158 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 YNL092WYNL092W 1203 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 RPS28AYOR167C 204 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 SPR2YOR214C 711 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 YPL205CYPL205C 345 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 YPR074W-AYPR074W-A 171 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 TRE2YOR256C 2430 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 PPM2YOL141W 2088 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 SEO1YAL067C 1782 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 POL31YJR006W 1464 nt5.57□□□□□ -1.52
TY1A-PR3Q6Q5H1 STR2YJR130C 1920 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 GIP1YBR045C 1920 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 RAD59YDL059C 717 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 VPS61YDR136C 573 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 YHL009W-AYHL009W-A 1242 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 SQT1YIR012W 1296 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 YJL147CYJL147C 1149 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 YLR123CYLR123C 330 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 ERD2YBL040C 660 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 NIS1YNL078W 1224 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 YNL203CYNL203C 612 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 CUE5YOR042W 1236 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 AMA1YGR225W 1782 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 VPS70YJR126C 2436 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 GGA1YDR358W 1674 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 IDS2YJL146W 1410 nt5.56□□□□□ -1.52
TY1A-PR3Q6Q5H1 UME1YPL139C 1383 nt5.55□□□□□ -1.52
TY1A-PR3Q6Q5H1 YLR446WYLR446W 1302 nt5.55□□□□□ -1.52
TY1A-PR3Q6Q5H1 RPL35BYDL136W 363 nt5.55□□□□□ -1.52
TY1A-PR3Q6Q5H1 YGR126WYGR126W 693 nt5.55□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms