Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 YAL047W-AYAL047W-A 330 nt5.16□□□□□ -1.58
RPN11P43588 GTT2YLL060C 702 nt5.16□□□□□ -1.58
RPN11P43588 YPL113CYPL113C 1191 nt5.16□□□□□ -1.58
RPN11P43588 FOB1YDR110W 1701 nt5.16□□□□□ -1.58
RPN11P43588 HST1YOL068C 1512 nt5.16□□□□□ -1.58
RPN11P43588 STE12YHR084W 2067 nt5.16□□□□□ -1.58
RPN11P43588 SIA1YOR137C 1869 nt5.15□□□□□ -1.58
RPN11P43588 LRG1YDL240W 3054 nt5.15□□□□□ -1.58
RPN11P43588 RAD16YBR114W 2373 nt5.15□□□□□ -1.58
RPN11P43588 CAB3YKL088W 1716 nt5.15□□□□□ -1.58
RPN11P43588 RAD4YER162C 2265 nt5.15□□□□□ -1.58
RPN11P43588 YGR011WYGR011W 327 nt5.15□□□□□ -1.59
RPN11P43588 SOD1YJR104C 465 nt5.15□□□□□ -1.59
RPN11P43588 CKS1YBR135W 453 nt5.15□□□□□ -1.59
RPN11P43588 FKH2YNL068C 2589 nt5.15□□□□□ -1.59
RPN11P43588 TEL2YGR099W 2067 nt5.15□□□□□ -1.59
RPN11P43588 HIS4YCL030C 2400 nt5.15□□□□□ -1.59
RPN11P43588 ABZ1YNR033W 2364 nt5.14□□□□□ -1.59
RPN11P43588 MKK2YPL140C 1521 nt5.14□□□□□ -1.59
RPN11P43588 MCM21YDR318W 1107 nt5.14□□□□□ -1.59
RPN11P43588 FMP48YGR052W 1110 nt5.14□□□□□ -1.59
RPN11P43588 YKL162C-AYKL162C-A 153 nt5.14□□□□□ -1.59
RPN11P43588 SET4YJL105W 1683 nt5.14□□□□□ -1.59
RPN11P43588 NOP2YNL061W 1857 nt5.13□□□□□ -1.59
RPN11P43588 PRT1YOR361C 2292 nt5.13□□□□□ -1.59
RPN11P43588 ATG1YGL180W 2694 nt5.13□□□□□ -1.59
RPN11P43588 LOH1YJL038C 660 nt5.13□□□□□ -1.59
RPN11P43588 RPS31YLR167W 459 nt5.13□□□□□ -1.59
RPN11P43588 GTR1YML121W 933 nt5.13□□□□□ -1.59
RPN11P43588 ASI2YNL159C 870 nt5.13□□□□□ -1.59
RPN11P43588 snR10snR10 245 nt5.13□□□□□ -1.59
RPN11P43588 YPL073CYPL073C 486 nt5.13□□□□□ -1.59
RPN11P43588 YCL012CYCL012C 405 nt5.13□□□□□ -1.59
RPN11P43588 KIN3YAR018C 1308 nt5.13□□□□□ -1.59
RPN11P43588 FKH1YIL131C 1455 nt5.13□□□□□ -1.59
RPN11P43588 NSI1YDR026C 1713 nt5.12□□□□□ -1.59
RPN11P43588 YER134CYER134C 537 nt5.12□□□□□ -1.59
RPN11P43588 YGL262WYGL262W 528 nt5.12□□□□□ -1.59
RPN11P43588 YIL086CYIL086C 309 nt5.12□□□□□ -1.59
RPN11P43588 HSP150YJL159W 1242 nt5.12□□□□□ -1.59
RPN11P43588 SPG4YMR107W 348 nt5.12□□□□□ -1.59
RPN11P43588 HRT1YOL133W 366 nt5.12□□□□□ -1.59
RPN11P43588 VPS69YPR087W 321 nt5.12□□□□□ -1.59
RPN11P43588 OMS1YDR316W 1416 nt5.12□□□□□ -1.59
RPN11P43588 AAD4YDL243C 990 nt5.11□□□□□ -1.59
RPN11P43588 YDR391CYDR391C 699 nt5.11□□□□□ -1.59
RPN11P43588 ERG26YGL001C 1050 nt5.11□□□□□ -1.59
RPN11P43588 GVP36YIL041W 981 nt5.11□□□□□ -1.59
RPN11P43588 UIP3YAR027W 708 nt5.11□□□□□ -1.59
RPN11P43588 YMR084WYMR084W 789 nt5.11□□□□□ -1.59
RPN11P43588 YNL143CYNL143C 393 nt5.11□□□□□ -1.59
RPN11P43588 MFA2YNL145W 117 nt5.11□□□□□ -1.59
RPN11P43588 PET20YPL159C 762 nt5.11□□□□□ -1.59
RPN11P43588 ARO80YDR421W 2853 nt5.11□□□□□ -1.59
RPN11P43588 IMD2YHR216W 1572 nt5.11□□□□□ -1.59
RPN11P43588 MET7YOR241W 1647 nt5.11□□□□□ -1.59
RPN11P43588 VTC2YFL004W 2487 nt5.11□□□□□ -1.59
RPN11P43588 LHP1YDL051W 828 nt5.1□□□□□ -1.59
RPN11P43588 SPO16YHR153C 597 nt5.1□□□□□ -1.59
RPN11P43588 PBS2YJL128C 2007 nt5.1□□□□□ -1.59
RPN11P43588 YLR124WYLR124W 345 nt5.1□□□□□ -1.59
RPN11P43588 PFA4YOL003C 1137 nt5.1□□□□□ -1.59
RPN11P43588 GSH2YOL049W 1476 nt5.1□□□□□ -1.59
RPN11P43588 ECM33YBR078W 1290 nt5.1□□□□□ -1.59
RPN11P43588 SKG3YLR187W 3081 nt5.1□□□□□ -1.59
RPN11P43588 ERG7YHR072W 2196 nt5.09□□□□□ -1.59
RPN11P43588 RNA15YGL044C 891 nt5.09□□□□□ -1.59
RPN11P43588 DUO1YGL061C 744 nt5.09□□□□□ -1.59
RPN11P43588 DSD1YGL196W 1287 nt5.09□□□□□ -1.59
RPN11P43588 ATP12YJL180C 978 nt5.09□□□□□ -1.59
RPN11P43588 PIR3YKL163W 978 nt5.09□□□□□ -1.59
RPN11P43588 HEK2YBL032W 1146 nt5.09□□□□□ -1.59
RPN11P43588 YMR086C-AYMR086C-A 339 nt5.09□□□□□ -1.59
RPN11P43588 OPY1YBR129C 987 nt5.09□□□□□ -1.59
RPN11P43588 snR78snR78 87 nt5.08□□□□□ -1.6
RPN11P43588 YDR249CYDR249C 1122 nt5.08□□□□□ -1.6
RPN11P43588 HNT2YDR305C 654 nt5.08□□□□□ -1.6
RPN11P43588 YGL101WYGL101W 648 nt5.08□□□□□ -1.6
RPN11P43588 ZRT1YGL255W 1131 nt5.08□□□□□ -1.6
RPN11P43588 YGR273CYGR273C 525 nt5.08□□□□□ -1.6
RPN11P43588 MRP51YPL118W 1035 nt5.08□□□□□ -1.6
RPN11P43588 SLX1YBR228W 915 nt5.08□□□□□ -1.6
RPN11P43588 SPC97YHR172W 2472 nt5.07□□□□□ -1.6
RPN11P43588 YDL241WYDL241W 372 nt5.07□□□□□ -1.6
RPN11P43588 GRE3YHR104W 984 nt5.07□□□□□ -1.6
RPN11P43588 SSH1YBR283C 1473 nt5.07□□□□□ -1.6
RPN11P43588 HSP104YLL026W 2727 nt5.06□□□□□ -1.6
RPN11P43588 NVJ1YHR195W 966 nt5.06□□□□□ -1.6
RPN11P43588 ISA2YPR067W 558 nt5.06□□□□□ -1.6
RPN11P43588 LSG1YGL099W 1923 nt5.05□□□□□ -1.6
RPN11P43588 MTH1YDR277C 1302 nt5.05□□□□□ -1.6
RPN11P43588 ASF2YDL197C 1578 nt5.05□□□□□ -1.6
RPN11P43588 YDR545C-AYDR545C-A 480 nt5.05□□□□□ -1.6
RPN11P43588 YEL077W-AYEL077W-A 483 nt5.05□□□□□ -1.6
RPN11P43588 YER190C-BYER190C-B 483 nt5.05□□□□□ -1.6
RPN11P43588 YFL068WYFL068W 483 nt5.05□□□□□ -1.6
RPN11P43588 SKI6YGR195W 741 nt5.05□□□□□ -1.6
RPN11P43588 YGR296C-BYGR296C-B 483 nt5.05□□□□□ -1.6
RPN11P43588 YHL050W-AYHL050W-A 483 nt5.05□□□□□ -1.6
RPN11P43588 ARD1YHR013C 717 nt5.05□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 38 ms