Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 tG(GCC)G2tG(GCC)G2 71 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 tG(GCC)J1tG(GCC)J1 71 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 SUF23tG(GCC)J2 71 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 tG(GCC)MtG(GCC)M 71 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 tG(GCC)O1tG(GCC)O1 71 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 SUF17tG(GCC)O2 71 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 tG(GCC)P1tG(GCC)P1 71 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 tG(GCC)P2tG(GCC)P2 71 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 GLE2YER107C 1098 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 YGL109WYGL109W 324 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 YGR042WYGR042W 816 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 ERG9YHR190W 1335 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 LNP1YHR192W 837 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 YIL163CYIL163C 354 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 MNN11YJL183W 1269 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 MSC3YLR219W 2187 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 MAP2YBL091C 1266 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 VPS5YOR069W 2028 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 KTR1YOR099W 1182 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 DGA1YOR245C 1257 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 ERV2YPR037C 591 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 YBR113WYBR113W 483 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 THI2YBR240C 1353 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 SDH8YBR269C 417 nt5.61□□□□□ -1.51
TY1A-LR2P0CX72 RGP1YDR137W 1992 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 UBC9YDL064W 474 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 YDL177CYDL177C 513 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 PAU5YFL020C 369 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 PGD1YGL025C 1194 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 YIL082WYIL082W 873 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 AIM20YIL158W 615 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 DCN1YLR128W 810 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 YMR099CYMR099C 894 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 PET123YOR158W 957 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 SPC29YPL124W 762 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 DPM1YPR183W 804 nt5.6□□□□□ -1.51
TY1A-LR2P0CX72 MEC3YLR288C 1425 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 SLU7YDR088C 1149 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 MST27YGL051W 705 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 TAN1YGL232W 870 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 YJL213WYJL213W 996 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 CCP1YKR066C 1086 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 MST28YAR033W 705 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 YHC1YLR298C 696 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 YLR444CYLR444C 303 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 TSA1YML028W 591 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 RRG7YOR305W 729 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 POP7YBR167C 423 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 SMF1YOL122C 1728 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 YOL036WYOL036W 2286 nt5.59□□□□□ -1.51
TY1A-LR2P0CX72 STT3YGL022W 2157 nt5.59□□□□□ -1.52
TY1A-LR2P0CX72 FMP40YPL222W 2067 nt5.59□□□□□ -1.52
TY1A-LR2P0CX72 NFS1YCL017C 1494 nt5.58□□□□□ -1.52
TY1A-LR2P0CX72 DIA3YDL024C 1407 nt5.58□□□□□ -1.52
TY1A-LR2P0CX72 YDR210W-AYDR210W-A 1317 nt5.58□□□□□ -1.52
TY1A-LR2P0CX72 YCR085WYCR085W 354 nt5.58□□□□□ -1.52
TY1A-LR2P0CX72 ARF3YOR094W 552 nt5.58□□□□□ -1.52
TY1A-LR2P0CX72 YJL163CYJL163C 1668 nt5.58□□□□□ -1.52
TY1A-LR2P0CX72 PTK2YJR059W 2457 nt5.58□□□□□ -1.52
TY1A-LR2P0CX72 VNX1YNL321W 2727 nt5.58□□□□□ -1.52
TY1A-LR2P0CX72 CLB1YGR108W 1416 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 RGL1YPL066W 1440 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 YGL176CYGL176C 1665 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 DPH2YKL191W 1605 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 HED1YDR014W-A 489 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 YGR109W-AYGR109W-A 873 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 YJR141WYJR141W 1044 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 MRPL13YKR006C 795 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 YLR217WYLR217W 324 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 RPL31BYLR406C 342 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 YOX1YML027W 1158 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 YNL092WYNL092W 1203 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 RPS28AYOR167C 204 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 SPR2YOR214C 711 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 YPL205CYPL205C 345 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 YPR074W-AYPR074W-A 171 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 TRE2YOR256C 2430 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 PPM2YOL141W 2088 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 SEO1YAL067C 1782 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 POL31YJR006W 1464 nt5.57□□□□□ -1.52
TY1A-LR2P0CX72 STR2YJR130C 1920 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 GIP1YBR045C 1920 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 RAD59YDL059C 717 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 VPS61YDR136C 573 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 YHL009W-AYHL009W-A 1242 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 SQT1YIR012W 1296 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 YJL147CYJL147C 1149 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 YLR123CYLR123C 330 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 ERD2YBL040C 660 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 NIS1YNL078W 1224 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 YNL203CYNL203C 612 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 CUE5YOR042W 1236 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 AMA1YGR225W 1782 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 VPS70YJR126C 2436 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 GGA1YDR358W 1674 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 IDS2YJL146W 1410 nt5.56□□□□□ -1.52
TY1A-LR2P0CX72 UME1YPL139C 1383 nt5.55□□□□□ -1.52
TY1A-LR2P0CX72 YLR446WYLR446W 1302 nt5.55□□□□□ -1.52
TY1A-LR2P0CX72 RPL35BYDL136W 363 nt5.55□□□□□ -1.52
TY1A-LR2P0CX72 YGR126WYGR126W 693 nt5.55□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 69.4 ms