Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YLR179CYLR179C 606 nt9.27□□□□□ -0.93
ATG40Q99325 SNG1YGR197C 1644 nt9.26□□□□□ -0.93
ATG40Q99325 YDL086C-AYDL086C-A 435 nt9.25□□□□□ -0.93
ATG40Q99325 SWE1YJL187C 2460 nt9.23□□□□□ -0.93
ATG40Q99325 MIC10YCL057C-A 294 nt9.23□□□□□ -0.93
ATG40Q99325 SPC25YER018C 666 nt9.22□□□□□ -0.93
ATG40Q99325 STB1YNL309W 1263 nt9.22□□□□□ -0.93
ATG40Q99325 RAX1YOR301W 1308 nt9.21□□□□□ -0.94
ATG40Q99325 ANP1YEL036C 1503 nt9.21□□□□□ -0.94
ATG40Q99325 RTG1YOL067C 534 nt9.2□□□□□ -0.94
ATG40Q99325 YDR524C-BYDR524C-B 201 nt9.19□□□□□ -0.94
ATG40Q99325 AHT1YHR093W 549 nt9.19□□□□□ -0.94
ATG40Q99325 YPR064WYPR064W 420 nt9.19□□□□□ -0.94
ATG40Q99325 GPI16YHR188C 1833 nt9.19□□□□□ -0.94
ATG40Q99325 WSC2YNL283C 1512 nt9.17□□□□□ -0.94
ATG40Q99325 MRPL8YJL063C 717 nt9.15□□□□□ -0.94
ATG40Q99325 BNA2YJR078W 1362 nt9.14□□□□□ -0.95
ATG40Q99325 YEL076C-AYEL076C-A 651 nt9.14□□□□□ -0.95
ATG40Q99325 YEL076CYEL076C 651 nt9.14□□□□□ -0.95
ATG40Q99325 YLR464WYLR464W 651 nt9.14□□□□□ -0.95
ATG40Q99325 FEN2YCR028C 1539 nt9.14□□□□□ -0.95
ATG40Q99325 CCT4YDL143W 1587 nt9.12□□□□□ -0.95
ATG40Q99325 TAD3YLR316C 969 nt9.11□□□□□ -0.95
ATG40Q99325 VPS60YDR486C 690 nt9.1□□□□□ -0.95
ATG40Q99325 HUA1YGR268C 597 nt9.1□□□□□ -0.95
ATG40Q99325 MIC12YBR262C 321 nt9.1□□□□□ -0.95
ATG40Q99325 ADO1YJR105W 1023 nt9.08□□□□□ -0.96
ATG40Q99325 SWC5YBR231C 912 nt9.08□□□□□ -0.96
ATG40Q99325 CCA1YER168C 1641 nt9.06□□□□□ -0.96
ATG40Q99325 HSP60YLR259C 1719 nt9.06□□□□□ -0.96
ATG40Q99325 tL(GAG)GtL(GAG)G 82 nt9.06□□□□□ -0.96
ATG40Q99325 YIR016WYIR016W 798 nt9.06□□□□□ -0.96
ATG40Q99325 ALG3YBL082C 1377 nt9.03□□□□□ -0.96
ATG40Q99325 YGR201CYGR201C 678 nt9□□□□□ -0.97
ATG40Q99325 HHO1YPL127C 777 nt8.99□□□□□ -0.97
ATG40Q99325 YLR415CYLR415C 339 nt8.98□□□□□ -0.97
ATG40Q99325 GLK1YCL040W 1503 nt8.98□□□□□ -0.97
ATG40Q99325 BDH1YAL060W 1149 nt8.97□□□□□ -0.97
ATG40Q99325 FUR4YBR021W 1902 nt8.95□□□□□ -0.98
ATG40Q99325 ALG12YNR030W 1656 nt8.94□□□□□ -0.98
ATG40Q99325 MCH5YOR306C 1566 nt8.93□□□□□ -0.98
ATG40Q99325 AGP1YCL025C 1902 nt8.92□□□□□ -0.98
ATG40Q99325 XDJ1YLR090W 1380 nt8.9□□□□□ -0.98
ATG40Q99325 YSP3YOR003W 1437 nt8.89□□□□□ -0.99
ATG40Q99325 YCL074WYCL074W 927 nt8.87□□□□□ -0.99
ATG40Q99325 DUS1YML080W 1272 nt8.87□□□□□ -0.99
ATG40Q99325 TIM17YJL143W 477 nt8.86□□□□□ -0.99
ATG40Q99325 GDH3YAL062W 1374 nt8.86□□□□□ -0.99
ATG40Q99325 GOR1YNL274C 1053 nt8.83□□□□□ -1
ATG40Q99325 PEX25YPL112C 1185 nt8.83□□□□□ -1
ATG40Q99325 AVT6YER119C 1347 nt8.82□□□□□ -1
ATG40Q99325 SHM2YLR058C 1410 nt8.82□□□□□ -1
ATG40Q99325 PRP4YPR178W 1398 nt8.82□□□□□ -1
ATG40Q99325 YNL115CYNL115C 1935 nt8.8□□□□□ -1
ATG40Q99325 BMT6YLR063W 1098 nt8.8□□□□□ -1
ATG40Q99325 AAC1YMR056C 930 nt8.79□□□□□ -1
ATG40Q99325 YFR018CYFR018C 1092 nt8.78□□□□□ -1
ATG40Q99325 VPS75YNL246W 795 nt8.77□□□□□ -1.01
ATG40Q99325 YKR005CYKR005C 1578 nt8.77□□□□□ -1.01
ATG40Q99325 DAT1YML113W 747 nt8.76□□□□□ -1.01
ATG40Q99325 STR3YGL184C 1398 nt8.75□□□□□ -1.01
ATG40Q99325 DUT1YBR252W 444 nt8.75□□□□□ -1.01
ATG40Q99325 DPS1YLL018C 1674 nt8.75□□□□□ -1.01
ATG40Q99325 NAR1YNL240C 1476 nt8.74□□□□□ -1.01
ATG40Q99325 YGR259CYGR259C 441 nt8.73□□□□□ -1.01
ATG40Q99325 NIT1YIL164C 600 nt8.73□□□□□ -1.01
ATG40Q99325 RDN18-1RDN18-1 1800 nt8.71□□□□□ -1.01
ATG40Q99325 RDN18-2RDN18-2 1800 nt8.71□□□□□ -1.01
ATG40Q99325 YDR094WYDR094W 336 nt8.71□□□□□ -1.02
ATG40Q99325 YFL066CYFL066C 1179 nt8.7□□□□□ -1.02
ATG40Q99325 SGT2YOR007C 1041 nt8.7□□□□□ -1.02
ATG40Q99325 AQY2YLL052C 450 nt8.69□□□□□ -1.02
ATG40Q99325 YCR102CYCR102C 1107 nt8.68□□□□□ -1.02
ATG40Q99325 RTN2YDL204W 1182 nt8.67□□□□□ -1.02
ATG40Q99325 RRT5YFR032C 870 nt8.66□□□□□ -1.02
ATG40Q99325 IRC24YIR036C 792 nt8.65□□□□□ -1.02
ATG40Q99325 PRE6YOL038W 765 nt8.63□□□□□ -1.03
ATG40Q99325 NBP35YGL091C 987 nt8.62□□□□□ -1.03
ATG40Q99325 PAU7YAR020C 168 nt8.62□□□□□ -1.03
ATG40Q99325 BIO5YNR056C 1686 nt8.57□□□□□ -1.04
ATG40Q99325 ARP6YLR085C 1317 nt8.56□□□□□ -1.04
ATG40Q99325 SNF1YDR477W 1902 nt8.56□□□□□ -1.04
ATG40Q99325 TIR3YIL011W 810 nt8.54□□□□□ -1.04
ATG40Q99325 PAU16YKL224C 372 nt8.54□□□□□ -1.04
ATG40Q99325 LSC2YGR244C 1284 nt8.53□□□□□ -1.04
ATG40Q99325 UBX6YJL048C 1191 nt8.53□□□□□ -1.04
ATG40Q99325 MIR1YJR077C 936 nt8.52□□□□□ -1.05
ATG40Q99325 CYT2YKL087C 675 nt8.52□□□□□ -1.05
ATG40Q99325 SHB17YKR043C 816 nt8.51□□□□□ -1.05
ATG40Q99325 YDR010CYDR010C 333 nt8.5□□□□□ -1.05
ATG40Q99325 Q0182Q0182 405 nt8.49□□□□□ -1.05
ATG40Q99325 PLB1YMR008C 1995 nt8.49□□□□□ -1.05
ATG40Q99325 CMP2YML057W 1815 nt8.49□□□□□ -1.05
ATG40Q99325 RET2YFR051C 1641 nt8.47□□□□□ -1.05
ATG40Q99325 PBP1YGR178C 2169 nt8.46□□□□□ -1.05
ATG40Q99325 THI74YDR438W 1113 nt8.46□□□□□ -1.06
ATG40Q99325 YML089CYML089C 369 nt8.45□□□□□ -1.06
ATG40Q99325 UBA4YHR111W 1323 nt8.45□□□□□ -1.06
ATG40Q99325 NAT4YMR069W 858 nt8.44□□□□□ -1.06
ATG40Q99325 POM34YLR018C 900 nt8.43□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 25 ms