Protein–RNA interactions for Protein: Q99219

TY3A-I, Transposon Ty3-I Gag polyprotein, yeastyeast

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY3A-IQ99219 TAT1YBR069C 1860 nt12.19□□□□□ -0.46
TY3A-IQ99219 GLR1YPL091W 1452 nt12.18□□□□□ -0.46
TY3A-IQ99219 GAL1YBR020W 1587 nt12.17□□□□□ -0.46
TY3A-IQ99219 VPS75YNL246W 795 nt12.16□□□□□ -0.46
TY3A-IQ99219 STB1YNL309W 1263 nt12.14□□□□□ -0.47
TY3A-IQ99219 CCT4YDL143W 1587 nt12.13□□□□□ -0.47
TY3A-IQ99219 BIO4YNR057C 714 nt12.12□□□□□ -0.47
TY3A-IQ99219 SWC5YBR231C 912 nt12.11□□□□□ -0.47
TY3A-IQ99219 TRM5YHR070W 1500 nt12.11□□□□□ -0.47
TY3A-IQ99219 SPC25YER018C 666 nt12.1□□□□□ -0.47
TY3A-IQ99219 SIM1YIL123W 1431 nt12.1□□□□□ -0.47
TY3A-IQ99219 GPI16YHR188C 1833 nt12.09□□□□□ -0.47
TY3A-IQ99219 YDR524C-BYDR524C-B 201 nt12.08□□□□□ -0.48
TY3A-IQ99219 PAU7YAR020C 168 nt12.08□□□□□ -0.48
TY3A-IQ99219 DAT1YML113W 747 nt12.08□□□□□ -0.48
TY3A-IQ99219 DDR2YOL052C-A 186 nt12.06□□□□□ -0.48
TY3A-IQ99219 RBG2YGR173W 1107 nt12.05□□□□□ -0.48
TY3A-IQ99219 YBR220CYBR220C 1683 nt12.03□□□□□ -0.48
TY3A-IQ99219 YGL034CYGL034C 366 nt12.03□□□□□ -0.48
TY3A-IQ99219 VPS60YDR486C 690 nt12□□□□□ -0.49
TY3A-IQ99219 YFL067WYFL067W 528 nt11.99□□□□□ -0.49
TY3A-IQ99219 NDI1YML120C 1542 nt11.98□□□□□ -0.49
TY3A-IQ99219 SPT8YLR055C 1809 nt11.97□□□□□ -0.49
TY3A-IQ99219 RRT12YCR045C 1476 nt11.95□□□□□ -0.5
TY3A-IQ99219 UBA4YHR111W 1323 nt11.95□□□□□ -0.5
TY3A-IQ99219 ATF2YGR177C 1608 nt11.93□□□□□ -0.5
TY3A-IQ99219 YDL086C-AYDL086C-A 435 nt11.93□□□□□ -0.5
TY3A-IQ99219 ERF2YLR246W 1080 nt11.93□□□□□ -0.5
TY3A-IQ99219 YSR3YKR053C 1215 nt11.92□□□□□ -0.5
TY3A-IQ99219 ALG3YBL082C 1377 nt11.92□□□□□ -0.5
TY3A-IQ99219 FEN2YCR028C 1539 nt11.91□□□□□ -0.5
TY3A-IQ99219 PAC11YDR488C 1602 nt11.91□□□□□ -0.5
TY3A-IQ99219 TIM17YJL143W 477 nt11.89□□□□□ -0.51
TY3A-IQ99219 RBG1YAL036C 1110 nt11.89□□□□□ -0.51
TY3A-IQ99219 SHB17YKR043C 816 nt11.87□□□□□ -0.51
TY3A-IQ99219 YMR226CYMR226C 804 nt11.85□□□□□ -0.51
TY3A-IQ99219 XYL2YLR070C 1071 nt11.84□□□□□ -0.51
TY3A-IQ99219 ANP1YEL036C 1503 nt11.83□□□□□ -0.52
TY3A-IQ99219 CRR1YLR213C 1269 nt11.81□□□□□ -0.52
TY3A-IQ99219 YCR087WYCR087W 516 nt11.79□□□□□ -0.52
TY3A-IQ99219 YIR016WYIR016W 798 nt11.78□□□□□ -0.52
TY3A-IQ99219 Q0182Q0182 405 nt11.77□□□□□ -0.53
TY3A-IQ99219 SAM1YLR180W 1149 nt11.77□□□□□ -0.53
TY3A-IQ99219 YHL050CYHL050C 2094 nt11.77□□□□□ -0.53
TY3A-IQ99219 HEM12YDR047W 1089 nt11.73□□□□□ -0.53
TY3A-IQ99219 SNG1YGR197C 1644 nt11.72□□□□□ -0.53
TY3A-IQ99219 AIM45YPR004C 1035 nt11.72□□□□□ -0.53
TY3A-IQ99219 PHO89YBR296C 1725 nt11.72□□□□□ -0.53
TY3A-IQ99219 SHM2YLR058C 1410 nt11.71□□□□□ -0.53
TY3A-IQ99219 YDR010CYDR010C 333 nt11.71□□□□□ -0.53
TY3A-IQ99219 RET2YFR051C 1641 nt11.68□□□□□ -0.54
TY3A-IQ99219 YLR111WYLR111W 333 nt11.66□□□□□ -0.54
TY3A-IQ99219 SGT2YOR007C 1041 nt11.64□□□□□ -0.55
TY3A-IQ99219 XDJ1YLR090W 1380 nt11.64□□□□□ -0.55
TY3A-IQ99219 PCH2YBR186W 1695 nt11.63□□□□□ -0.55
TY3A-IQ99219 MIC10YCL057C-A 294 nt11.63□□□□□ -0.55
TY3A-IQ99219 MRP20YDR405W 792 nt11.62□□□□□ -0.55
TY3A-IQ99219 SEC11YIR022W 504 nt11.6□□□□□ -0.55
TY3A-IQ99219 RPM1RPM1 483 nt11.6□□□□□ -0.55
TY3A-IQ99219 GUT2YIL155C 1950 nt11.59□□□□□ -0.55
TY3A-IQ99219 BNA2YJR078W 1362 nt11.58□□□□□ -0.56
TY3A-IQ99219 NIT1YIL164C 600 nt11.57□□□□□ -0.56
TY3A-IQ99219 GDH3YAL062W 1374 nt11.55□□□□□ -0.56
TY3A-IQ99219 RAD51YER095W 1203 nt11.5□□□□□ -0.57
TY3A-IQ99219 LYS4YDR234W 2082 nt11.5□□□□□ -0.57
TY3A-IQ99219 COQ2YNR041C 1119 nt11.49□□□□□ -0.57
TY3A-IQ99219 NVJ2YPR091C 2313 nt11.49□□□□□ -0.57
TY3A-IQ99219 SDH5YOL071W 489 nt11.48□□□□□ -0.57
TY3A-IQ99219 YGR201CYGR201C 678 nt11.43□□□□□ -0.58
TY3A-IQ99219 YNR029CYNR029C 1290 nt11.43□□□□□ -0.58
TY3A-IQ99219 STE4YOR212W 1272 nt11.43□□□□□ -0.58
TY3A-IQ99219 MIC12YBR262C 321 nt11.43□□□□□ -0.58
TY3A-IQ99219 NCP1YHR042W 2076 nt11.42□□□□□ -0.58
TY3A-IQ99219 RPL4BYDR012W 1089 nt11.42□□□□□ -0.58
TY3A-IQ99219 RPL4AYBR031W 1089 nt11.42□□□□□ -0.58
TY3A-IQ99219 HHO1YPL127C 777 nt11.41□□□□□ -0.58
TY3A-IQ99219 CLB6YGR109C 1143 nt11.4□□□□□ -0.58
TY3A-IQ99219 RAD23YEL037C 1197 nt11.39□□□□□ -0.59
TY3A-IQ99219 PIB2YGL023C 1908 nt11.39□□□□□ -0.59
TY3A-IQ99219 AVT6YER119C 1347 nt11.37□□□□□ -0.59
TY3A-IQ99219 YHR056W-AYHR056W-A 435 nt11.37□□□□□ -0.59
TY3A-IQ99219 RAX1YOR301W 1308 nt11.35□□□□□ -0.59
TY3A-IQ99219 ADH7YCR105W 1086 nt11.34□□□□□ -0.59
TY3A-IQ99219 SFA1YDL168W 1161 nt11.34□□□□□ -0.59
TY3A-IQ99219 YHL019W-AYHL019W-A 594 nt11.34□□□□□ -0.59
TY3A-IQ99219 YCR102CYCR102C 1107 nt11.33□□□□□ -0.6
TY3A-IQ99219 YLR349WYLR349W 507 nt11.33□□□□□ -0.6
TY3A-IQ99219 BOP3YNL042W 1191 nt11.33□□□□□ -0.6
TY3A-IQ99219 GOR1YNL274C 1053 nt11.33□□□□□ -0.6
TY3A-IQ99219 PAU15YIR041W 375 nt11.31□□□□□ -0.6
TY3A-IQ99219 RPS14BYJL191W 417 nt11.3□□□□□ -0.6
TY3A-IQ99219 FUN14YAL008W 597 nt11.29□□□□□ -0.6
TY3A-IQ99219 YLR437C-AYLR437C-A 228 nt11.29□□□□□ -0.6
TY3A-IQ99219 RTF1YGL244W 1677 nt11.29□□□□□ -0.6
TY3A-IQ99219 UTH1YKR042W 1098 nt11.27□□□□□ -0.61
TY3A-IQ99219 TSC10YBR265W 963 nt11.25□□□□□ -0.61
TY3A-IQ99219 YJL195CYJL195C 702 nt11.24□□□□□ -0.61
TY3A-IQ99219 RIB3YDR487C 627 nt11.23□□□□□ -0.61
TY3A-IQ99219 YGR012WYGR012W 1182 nt11.21□□□□□ -0.61
TY3A-IQ99219 YLR279WYLR279W 390 nt11.21□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms