Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 HEM12YDR047W 1089 nt12.47□□□□□ -0.41
LCD1Q04377 RNQ1YCL028W 1218 nt12.46□□□□□ -0.41
LCD1Q04377 ALG12YNR030W 1656 nt12.45□□□□□ -0.42
LCD1Q04377 CCA1YER168C 1641 nt12.44□□□□□ -0.42
LCD1Q04377 FRD1YEL047C 1413 nt12.43□□□□□ -0.42
LCD1Q04377 SNG1YGR197C 1644 nt12.42□□□□□ -0.42
LCD1Q04377 RAX1YOR301W 1308 nt12.41□□□□□ -0.42
LCD1Q04377 YFL067WYFL067W 528 nt12.38□□□□□ -0.43
LCD1Q04377 FTR1YER145C 1215 nt12.37□□□□□ -0.43
LCD1Q04377 TRM5YHR070W 1500 nt12.35□□□□□ -0.43
LCD1Q04377 MCH5YOR306C 1566 nt12.35□□□□□ -0.43
LCD1Q04377 GAL1YBR020W 1587 nt12.33□□□□□ -0.44
LCD1Q04377 PRP4YPR178W 1398 nt12.31□□□□□ -0.44
LCD1Q04377 DDR2YOL052C-A 186 nt12.3□□□□□ -0.44
LCD1Q04377 DIC1YLR348C 897 nt12.29□□□□□ -0.44
LCD1Q04377 YDL086C-AYDL086C-A 435 nt12.25□□□□□ -0.45
LCD1Q04377 DPS1YLL018C 1674 nt12.25□□□□□ -0.45
LCD1Q04377 AAC1YMR056C 930 nt12.23□□□□□ -0.45
LCD1Q04377 ANP1YEL036C 1503 nt12.21□□□□□ -0.46
LCD1Q04377 BNA2YJR078W 1362 nt12.19□□□□□ -0.46
LCD1Q04377 AGP1YCL025C 1902 nt12.16□□□□□ -0.46
LCD1Q04377 YKR005CYKR005C 1578 nt12.15□□□□□ -0.46
LCD1Q04377 MIC12YBR262C 321 nt12.14□□□□□ -0.47
LCD1Q04377 SBA1YKL117W 651 nt12.13□□□□□ -0.47
LCD1Q04377 YKL030WYKL030W 606 nt12.12□□□□□ -0.47
LCD1Q04377 BMT6YLR063W 1098 nt12.12□□□□□ -0.47
LCD1Q04377 AQY1YPR192W 918 nt12.12□□□□□ -0.47
LCD1Q04377 WSC2YNL283C 1512 nt12.11□□□□□ -0.47
LCD1Q04377 NAR1YNL240C 1476 nt12.11□□□□□ -0.47
LCD1Q04377 YDR524C-BYDR524C-B 201 nt12.11□□□□□ -0.47
LCD1Q04377 DUS1YML080W 1272 nt12.11□□□□□ -0.47
LCD1Q04377 STB1YNL309W 1263 nt12.11□□□□□ -0.47
LCD1Q04377 SNF1YDR477W 1902 nt12.09□□□□□ -0.47
LCD1Q04377 FEN2YCR028C 1539 nt12.09□□□□□ -0.47
LCD1Q04377 BIO5YNR056C 1686 nt12.08□□□□□ -0.48
LCD1Q04377 PTH1YHR189W 573 nt12.08□□□□□ -0.48
LCD1Q04377 YLR235CYLR235C 399 nt12.08□□□□□ -0.48
LCD1Q04377 SPC25YER018C 666 nt12.07□□□□□ -0.48
LCD1Q04377 YCL074WYCL074W 927 nt12.06□□□□□ -0.48
LCD1Q04377 HHO1YPL127C 777 nt12.05□□□□□ -0.48
LCD1Q04377 YGR259CYGR259C 441 nt12.03□□□□□ -0.48
LCD1Q04377 PAU16YKL224C 372 nt12.02□□□□□ -0.49
LCD1Q04377 TIM23YNR017W 669 nt12.02□□□□□ -0.49
LCD1Q04377 GPI16YHR188C 1833 nt12.02□□□□□ -0.49
LCD1Q04377 YLR179CYLR179C 606 nt12.01□□□□□ -0.49
LCD1Q04377 YIR016WYIR016W 798 nt12□□□□□ -0.49
LCD1Q04377 VPS60YDR486C 690 nt11.98□□□□□ -0.49
LCD1Q04377 YFR018CYFR018C 1092 nt11.97□□□□□ -0.49
LCD1Q04377 PBP1YGR178C 2169 nt11.95□□□□□ -0.5
LCD1Q04377 CCT4YDL143W 1587 nt11.94□□□□□ -0.5
LCD1Q04377 RRT5YFR032C 870 nt11.94□□□□□ -0.5
LCD1Q04377 IRC24YIR036C 792 nt11.94□□□□□ -0.5
LCD1Q04377 XDJ1YLR090W 1380 nt11.93□□□□□ -0.5
LCD1Q04377 ALG3YBL082C 1377 nt11.92□□□□□ -0.5
LCD1Q04377 RDN18-1RDN18-1 1800 nt11.92□□□□□ -0.5
LCD1Q04377 RDN18-2RDN18-2 1800 nt11.92□□□□□ -0.5
LCD1Q04377 DUT1YBR252W 444 nt11.91□□□□□ -0.5
LCD1Q04377 YGR201CYGR201C 678 nt11.89□□□□□ -0.51
LCD1Q04377 AHT1YHR093W 549 nt11.89□□□□□ -0.51
LCD1Q04377 STR3YGL184C 1398 nt11.89□□□□□ -0.51
LCD1Q04377 tL(GAG)GtL(GAG)G 82 nt11.88□□□□□ -0.51
LCD1Q04377 CYT2YKL087C 675 nt11.88□□□□□ -0.51
LCD1Q04377 SWC5YBR231C 912 nt11.86□□□□□ -0.51
LCD1Q04377 PRE6YOL038W 765 nt11.81□□□□□ -0.52
LCD1Q04377 AQY2YLL052C 450 nt11.78□□□□□ -0.52
LCD1Q04377 YPR064WYPR064W 420 nt11.77□□□□□ -0.53
LCD1Q04377 RDN37-1RDN37-1 5354 nt11.77□□□□□ -0.53
LCD1Q04377 RDN37-2RDN37-2 5354 nt11.77□□□□□ -0.53
LCD1Q04377 AVT6YER119C 1347 nt11.76□□□□□ -0.53
LCD1Q04377 GOR1YNL274C 1053 nt11.74□□□□□ -0.53
LCD1Q04377 GDH3YAL062W 1374 nt11.72□□□□□ -0.53
LCD1Q04377 TAD3YLR316C 969 nt11.69□□□□□ -0.54
LCD1Q04377 RTN2YDL204W 1182 nt11.67□□□□□ -0.54
LCD1Q04377 CMP2YML057W 1815 nt11.66□□□□□ -0.54
LCD1Q04377 YAT1YAR035W 2064 nt11.65□□□□□ -0.54
LCD1Q04377 NAT4YMR069W 858 nt11.62□□□□□ -0.55
LCD1Q04377 BDH1YAL060W 1149 nt11.6□□□□□ -0.55
LCD1Q04377 SHM2YLR058C 1410 nt11.6□□□□□ -0.55
LCD1Q04377 PEX25YPL112C 1185 nt11.55□□□□□ -0.56
LCD1Q04377 YFL066CYFL066C 1179 nt11.54□□□□□ -0.56
LCD1Q04377 YLR415CYLR415C 339 nt11.54□□□□□ -0.56
LCD1Q04377 PLB1YMR008C 1995 nt11.51□□□□□ -0.57
LCD1Q04377 TIM17YJL143W 477 nt11.48□□□□□ -0.57
LCD1Q04377 DAT1YML113W 747 nt11.48□□□□□ -0.57
LCD1Q04377 NDI1YML120C 1542 nt11.48□□□□□ -0.57
LCD1Q04377 NIT1YIL164C 600 nt11.47□□□□□ -0.57
LCD1Q04377 MSF1YPR047W 1410 nt11.46□□□□□ -0.57
LCD1Q04377 NBP35YGL091C 987 nt11.45□□□□□ -0.58
LCD1Q04377 HIF1YLL022C 1158 nt11.45□□□□□ -0.58
LCD1Q04377 YMR244WYMR244W 1068 nt11.45□□□□□ -0.58
LCD1Q04377 HSL7YBR133C 2484 nt11.44□□□□□ -0.58
LCD1Q04377 PRM5YIL117C 957 nt11.43□□□□□ -0.58
LCD1Q04377 ARP6YLR085C 1317 nt11.42□□□□□ -0.58
LCD1Q04377 YSP3YOR003W 1437 nt11.42□□□□□ -0.58
LCD1Q04377 YCR102CYCR102C 1107 nt11.41□□□□□ -0.58
LCD1Q04377 YNL115CYNL115C 1935 nt11.4□□□□□ -0.58
LCD1Q04377 ALD4YOR374W 1560 nt11.4□□□□□ -0.58
LCD1Q04377 SPT20YOL148C 1815 nt11.38□□□□□ -0.59
LCD1Q04377 THI74YDR438W 1113 nt11.38□□□□□ -0.59
LCD1Q04377 SGT2YOR007C 1041 nt11.38□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 6.1 ms