Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 UBX6YJL048C 1191 nt8.97□□□□□ -0.97
SSU72P53538 AQY1YPR192W 918 nt8.97□□□□□ -0.97
SSU72P53538 DDR2YOL052C-A 186 nt8.96□□□□□ -0.98
SSU72P53538 HSL7YBR133C 2484 nt8.94□□□□□ -0.98
SSU72P53538 CMP2YML057W 1815 nt8.94□□□□□ -0.98
SSU72P53538 MET2YNL277W 1461 nt8.94□□□□□ -0.98
SSU72P53538 GAL1YBR020W 1587 nt8.94□□□□□ -0.98
SSU72P53538 ATF2YGR177C 1608 nt8.94□□□□□ -0.98
SSU72P53538 YHR056W-AYHR056W-A 435 nt8.93□□□□□ -0.98
SSU72P53538 SWE1YJL187C 2460 nt8.93□□□□□ -0.98
SSU72P53538 TRM5YHR070W 1500 nt8.92□□□□□ -0.98
SSU72P53538 PTH1YHR189W 573 nt8.91□□□□□ -0.98
SSU72P53538 HEL2YDR266C 1920 nt8.91□□□□□ -0.98
SSU72P53538 RAX1YOR301W 1308 nt8.9□□□□□ -0.98
SSU72P53538 TIM23YNR017W 669 nt8.9□□□□□ -0.98
SSU72P53538 YDL086C-AYDL086C-A 435 nt8.89□□□□□ -0.99
SSU72P53538 SNG1YGR197C 1644 nt8.89□□□□□ -0.99
SSU72P53538 SPP1YPL138C 1062 nt8.88□□□□□ -0.99
SSU72P53538 YLR179CYLR179C 606 nt8.87□□□□□ -0.99
SSU72P53538 YKL030WYKL030W 606 nt8.86□□□□□ -0.99
SSU72P53538 MIC10YCL057C-A 294 nt8.86□□□□□ -0.99
SSU72P53538 BNA2YJR078W 1362 nt8.86□□□□□ -0.99
SSU72P53538 YAT1YAR035W 2064 nt8.85□□□□□ -0.99
SSU72P53538 STB1YNL309W 1263 nt8.84□□□□□ -0.99
SSU72P53538 RDN25-1RDN25-1 3396 nt8.82□□□□□ -1
SSU72P53538 RDN25-2RDN25-2 3396 nt8.82□□□□□ -1
SSU72P53538 GPI16YHR188C 1833 nt8.82□□□□□ -1
SSU72P53538 ANP1YEL036C 1503 nt8.82□□□□□ -1
SSU72P53538 YDR524C-BYDR524C-B 201 nt8.82□□□□□ -1
SSU72P53538 SPC25YER018C 666 nt8.82□□□□□ -1
SSU72P53538 ESBP6YNL125C 2022 nt8.81□□□□□ -1
SSU72P53538 YPR064WYPR064W 420 nt8.8□□□□□ -1
SSU72P53538 NPP1YCR026C 2229 nt8.79□□□□□ -1
SSU72P53538 FEN2YCR028C 1539 nt8.77□□□□□ -1.01
SSU72P53538 SFP1YLR403W 2052 nt8.76□□□□□ -1.01
SSU72P53538 AHT1YHR093W 549 nt8.76□□□□□ -1.01
SSU72P53538 GLK1YCL040W 1503 nt8.75□□□□□ -1.01
SSU72P53538 CCT4YDL143W 1587 nt8.74□□□□□ -1.01
SSU72P53538 CCA1YER168C 1641 nt8.74□□□□□ -1.01
SSU72P53538 SWC5YBR231C 912 nt8.74□□□□□ -1.01
SSU72P53538 ILV2YMR108W 2064 nt8.73□□□□□ -1.01
SSU72P53538 MIC12YBR262C 321 nt8.73□□□□□ -1.01
SSU72P53538 WSC2YNL283C 1512 nt8.72□□□□□ -1.01
SSU72P53538 VPS60YDR486C 690 nt8.71□□□□□ -1.02
SSU72P53538 TAD3YLR316C 969 nt8.7□□□□□ -1.02
SSU72P53538 DTR1YBR180W 1719 nt8.69□□□□□ -1.02
SSU72P53538 YIR016WYIR016W 798 nt8.69□□□□□ -1.02
SSU72P53538 HHO1YPL127C 777 nt8.69□□□□□ -1.02
SSU72P53538 FUR4YBR021W 1902 nt8.68□□□□□ -1.02
SSU72P53538 CYT2YKL087C 675 nt8.67□□□□□ -1.02
SSU72P53538 YGR201CYGR201C 678 nt8.66□□□□□ -1.02
SSU72P53538 RTG1YOL067C 534 nt8.65□□□□□ -1.02
SSU72P53538 HUA1YGR268C 597 nt8.64□□□□□ -1.03
SSU72P53538 DUS1YML080W 1272 nt8.64□□□□□ -1.03
SSU72P53538 AAC1YMR056C 930 nt8.64□□□□□ -1.03
SSU72P53538 ALG3YBL082C 1377 nt8.62□□□□□ -1.03
SSU72P53538 tL(GAG)GtL(GAG)G 82 nt8.62□□□□□ -1.03
SSU72P53538 YEL076C-AYEL076C-A 651 nt8.61□□□□□ -1.03
SSU72P53538 YEL076CYEL076C 651 nt8.61□□□□□ -1.03
SSU72P53538 YLR464WYLR464W 651 nt8.61□□□□□ -1.03
SSU72P53538 YCL074WYCL074W 927 nt8.59□□□□□ -1.03
SSU72P53538 MRPL8YJL063C 717 nt8.59□□□□□ -1.03
SSU72P53538 ADO1YJR105W 1023 nt8.59□□□□□ -1.03
SSU72P53538 YLR415CYLR415C 339 nt8.59□□□□□ -1.03
SSU72P53538 PBP1YGR178C 2169 nt8.59□□□□□ -1.03
SSU72P53538 HEM14YER014W 1620 nt8.58□□□□□ -1.04
SSU72P53538 BMT6YLR063W 1098 nt8.58□□□□□ -1.04
SSU72P53538 PRP4YPR178W 1398 nt8.58□□□□□ -1.04
SSU72P53538 AGP1YCL025C 1902 nt8.55□□□□□ -1.04
SSU72P53538 XDJ1YLR090W 1380 nt8.54□□□□□ -1.04
SSU72P53538 GOR1YNL274C 1053 nt8.54□□□□□ -1.04
SSU72P53538 MAE1YKL029C 2010 nt8.53□□□□□ -1.04
SSU72P53538 BDH1YAL060W 1149 nt8.53□□□□□ -1.04
SSU72P53538 GAL2YLR081W 1725 nt8.51□□□□□ -1.05
SSU72P53538 GDH3YAL062W 1374 nt8.51□□□□□ -1.05
SSU72P53538 NDI1YML120C 1542 nt8.51□□□□□ -1.05
SSU72P53538 TIM17YJL143W 477 nt8.51□□□□□ -1.05
SSU72P53538 AVT6YER119C 1347 nt8.51□□□□□ -1.05
SSU72P53538 YKR005CYKR005C 1578 nt8.5□□□□□ -1.05
SSU72P53538 DPS1YLL018C 1674 nt8.49□□□□□ -1.05
SSU72P53538 TPO4YOR273C 1980 nt8.48□□□□□ -1.05
SSU72P53538 HMG2YLR450W 3138 nt8.48□□□□□ -1.05
SSU72P53538 YGR259CYGR259C 441 nt8.46□□□□□ -1.06
SSU72P53538 UGA4YDL210W 1716 nt8.46□□□□□ -1.06
SSU72P53538 BIO5YNR056C 1686 nt8.45□□□□□ -1.06
SSU72P53538 SHM2YLR058C 1410 nt8.45□□□□□ -1.06
SSU72P53538 YSP3YOR003W 1437 nt8.44□□□□□ -1.06
SSU72P53538 RFC1YOR217W 2586 nt8.43□□□□□ -1.06
SSU72P53538 STR3YGL184C 1398 nt8.43□□□□□ -1.06
SSU72P53538 AQY2YLL052C 450 nt8.42□□□□□ -1.06
SSU72P53538 RIM8YGL045W 1629 nt8.42□□□□□ -1.06
SSU72P53538 GTB1YDR221W 2109 nt8.42□□□□□ -1.06
SSU72P53538 RSC4YKR008W 1878 nt8.4□□□□□ -1.06
SSU72P53538 IRC24YIR036C 792 nt8.4□□□□□ -1.06
SSU72P53538 PEX25YPL112C 1185 nt8.39□□□□□ -1.07
SSU72P53538 DUT1YBR252W 444 nt8.39□□□□□ -1.07
SSU72P53538 RTN2YDL204W 1182 nt8.38□□□□□ -1.07
SSU72P53538 DAT1YML113W 747 nt8.38□□□□□ -1.07
SSU72P53538 RDN18-1RDN18-1 1800 nt8.38□□□□□ -1.07
SSU72P53538 RDN18-2RDN18-2 1800 nt8.38□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 32.1 ms