Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YIH1YCR059C 777 nt9.62□□□□□ -0.87
SSN8P47821 AAC1YMR056C 930 nt9.6□□□□□ -0.87
SSN8P47821 RNQ1YCL028W 1218 nt9.6□□□□□ -0.87
SSN8P47821 BIO5YNR056C 1686 nt9.57□□□□□ -0.88
SSN8P47821 YLL053CYLL053C 459 nt9.55□□□□□ -0.88
SSN8P47821 ERF2YLR246W 1080 nt9.55□□□□□ -0.88
SSN8P47821 SPP1YPL138C 1062 nt9.55□□□□□ -0.88
SSN8P47821 LYS4YDR234W 2082 nt9.54□□□□□ -0.88
SSN8P47821 DIC1YLR348C 897 nt9.54□□□□□ -0.88
SSN8P47821 HMG2YLR450W 3138 nt9.52□□□□□ -0.89
SSN8P47821 CRR1YLR213C 1269 nt9.51□□□□□ -0.89
SSN8P47821 PTH1YHR189W 573 nt9.49□□□□□ -0.89
SSN8P47821 YLR235CYLR235C 399 nt9.49□□□□□ -0.89
SSN8P47821 MAE1YKL029C 2010 nt9.49□□□□□ -0.89
SSN8P47821 FTR1YER145C 1215 nt9.48□□□□□ -0.89
SSN8P47821 TPO4YOR273C 1980 nt9.48□□□□□ -0.89
SSN8P47821 PRP4YPR178W 1398 nt9.45□□□□□ -0.9
SSN8P47821 ATF2YGR177C 1608 nt9.45□□□□□ -0.9
SSN8P47821 YFL067WYFL067W 528 nt9.44□□□□□ -0.9
SSN8P47821 FUR4YBR021W 1902 nt9.44□□□□□ -0.9
SSN8P47821 GAL1YBR020W 1587 nt9.43□□□□□ -0.9
SSN8P47821 HEM12YDR047W 1089 nt9.42□□□□□ -0.9
SSN8P47821 TRM5YHR070W 1500 nt9.41□□□□□ -0.9
SSN8P47821 TIM23YNR017W 669 nt9.41□□□□□ -0.9
SSN8P47821 AQY1YPR192W 918 nt9.41□□□□□ -0.9
SSN8P47821 DPS1YLL018C 1674 nt9.41□□□□□ -0.9
SSN8P47821 NDI1YML120C 1542 nt9.41□□□□□ -0.9
SSN8P47821 DDR2YOL052C-A 186 nt9.4□□□□□ -0.9
SSN8P47821 RIM8YGL045W 1629 nt9.4□□□□□ -0.9
SSN8P47821 ESBP6YNL125C 2022 nt9.39□□□□□ -0.91
SSN8P47821 UGA4YDL210W 1716 nt9.39□□□□□ -0.91
SSN8P47821 SNG1YGR197C 1644 nt9.38□□□□□ -0.91
SSN8P47821 YEL076C-AYEL076C-A 651 nt9.38□□□□□ -0.91
SSN8P47821 YEL076CYEL076C 651 nt9.38□□□□□ -0.91
SSN8P47821 YKL030WYKL030W 606 nt9.38□□□□□ -0.91
SSN8P47821 YLR179CYLR179C 606 nt9.38□□□□□ -0.91
SSN8P47821 YLR464WYLR464W 651 nt9.38□□□□□ -0.91
SSN8P47821 YHR056W-AYHR056W-A 435 nt9.37□□□□□ -0.91
SSN8P47821 MIC10YCL057C-A 294 nt9.37□□□□□ -0.91
SSN8P47821 SNF1YDR477W 1902 nt9.36□□□□□ -0.91
SSN8P47821 YDL086C-AYDL086C-A 435 nt9.35□□□□□ -0.91
SSN8P47821 URA8YJR103W 1737 nt9.34□□□□□ -0.92
SSN8P47821 STB1YNL309W 1263 nt9.32□□□□□ -0.92
SSN8P47821 ANP1YEL036C 1503 nt9.31□□□□□ -0.92
SSN8P47821 RAX1YOR301W 1308 nt9.31□□□□□ -0.92
SSN8P47821 YDR524C-BYDR524C-B 201 nt9.3□□□□□ -0.92
SSN8P47821 SPC25YER018C 666 nt9.3□□□□□ -0.92
SSN8P47821 RTG1YOL067C 534 nt9.3□□□□□ -0.92
SSN8P47821 YGL114WYGL114W 2178 nt9.3□□□□□ -0.92
SSN8P47821 GTB1YDR221W 2109 nt9.29□□□□□ -0.92
SSN8P47821 ILV2YMR108W 2064 nt9.28□□□□□ -0.92
SSN8P47821 AHT1YHR093W 549 nt9.28□□□□□ -0.92
SSN8P47821 GPI16YHR188C 1833 nt9.28□□□□□ -0.92
SSN8P47821 WSC2YNL283C 1512 nt9.27□□□□□ -0.93
SSN8P47821 YPR064WYPR064W 420 nt9.27□□□□□ -0.93
SSN8P47821 RFC1YOR217W 2586 nt9.25□□□□□ -0.93
SSN8P47821 ACO2YJL200C 2370 nt9.25□□□□□ -0.93
SSN8P47821 FEN2YCR028C 1539 nt9.25□□□□□ -0.93
SSN8P47821 BNA2YJR078W 1362 nt9.24□□□□□ -0.93
SSN8P47821 SPT20YOL148C 1815 nt9.23□□□□□ -0.93
SSN8P47821 CCT4YDL143W 1587 nt9.23□□□□□ -0.93
SSN8P47821 CCA1YER168C 1641 nt9.21□□□□□ -0.93
SSN8P47821 VPS60YDR486C 690 nt9.21□□□□□ -0.94
SSN8P47821 BMT6YLR063W 1098 nt9.21□□□□□ -0.94
SSN8P47821 TAD3YLR316C 969 nt9.2□□□□□ -0.94
SSN8P47821 FRE6YLL051C 2139 nt9.19□□□□□ -0.94
SSN8P47821 SWC5YBR231C 912 nt9.19□□□□□ -0.94
SSN8P47821 DTR1YBR180W 1719 nt9.19□□□□□ -0.94
SSN8P47821 MRPL8YJL063C 717 nt9.18□□□□□ -0.94
SSN8P47821 MIC12YBR262C 321 nt9.18□□□□□ -0.94
SSN8P47821 YKR005CYKR005C 1578 nt9.17□□□□□ -0.94
SSN8P47821 HUA1YGR268C 597 nt9.17□□□□□ -0.94
SSN8P47821 YIR016WYIR016W 798 nt9.17□□□□□ -0.94
SSN8P47821 ALG3YBL082C 1377 nt9.15□□□□□ -0.94
SSN8P47821 ADO1YJR105W 1023 nt9.14□□□□□ -0.95
SSN8P47821 tL(GAG)GtL(GAG)G 82 nt9.13□□□□□ -0.95
SSN8P47821 BSP1YPR171W 1731 nt9.11□□□□□ -0.95
SSN8P47821 HHO1YPL127C 777 nt9.11□□□□□ -0.95
SSN8P47821 GAL2YLR081W 1725 nt9.1□□□□□ -0.95
SSN8P47821 IRC24YIR036C 792 nt9.09□□□□□ -0.95
SSN8P47821 THI72YOR192C 1800 nt9.08□□□□□ -0.96
SSN8P47821 BDH1YAL060W 1149 nt9.07□□□□□ -0.96
SSN8P47821 YLR415CYLR415C 339 nt9.07□□□□□ -0.96
SSN8P47821 TOK1YJL093C 2076 nt9.06□□□□□ -0.96
SSN8P47821 YGR201CYGR201C 678 nt9.06□□□□□ -0.96
SSN8P47821 UBX6YJL048C 1191 nt9.06□□□□□ -0.96
SSN8P47821 MUP1YGR055W 1725 nt9.05□□□□□ -0.96
SSN8P47821 AGP1YCL025C 1902 nt9.04□□□□□ -0.96
SSN8P47821 YGR259CYGR259C 441 nt9.03□□□□□ -0.96
SSN8P47821 RPC82YPR190C 1965 nt9.01□□□□□ -0.97
SSN8P47821 XDJ1YLR090W 1380 nt9□□□□□ -0.97
SSN8P47821 DUS1YML080W 1272 nt9□□□□□ -0.97
SSN8P47821 YCL074WYCL074W 927 nt8.99□□□□□ -0.97
SSN8P47821 YSP3YOR003W 1437 nt8.98□□□□□ -0.97
SSN8P47821 GDH3YAL062W 1374 nt8.96□□□□□ -0.98
SSN8P47821 TIM17YJL143W 477 nt8.94□□□□□ -0.98
SSN8P47821 AVT6YER119C 1347 nt8.94□□□□□ -0.98
SSN8P47821 GOR1YNL274C 1053 nt8.93□□□□□ -0.98
SSN8P47821 SHM2YLR058C 1410 nt8.93□□□□□ -0.98
SSN8P47821 PEX25YPL112C 1185 nt8.91□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms