Protein–RNA interactions for Protein: P40985

HUL4, Probable E3 ubiquitin-protein ligase HUL4, yeastyeast

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HUL4P40985 ATF2YGR177C 1608 nt12.09□□□□□ -0.47
HUL4P40985 ERF2YLR246W 1080 nt12.09□□□□□ -0.47
HUL4P40985 CRR1YLR213C 1269 nt12.06□□□□□ -0.48
HUL4P40985 WSC2YNL283C 1512 nt12.03□□□□□ -0.48
HUL4P40985 BOR1YNL275W 1731 nt12.01□□□□□ -0.49
HUL4P40985 DDR2YOL052C-A 186 nt12□□□□□ -0.49
HUL4P40985 YFL067WYFL067W 528 nt11.99□□□□□ -0.49
HUL4P40985 AHT1YHR093W 549 nt11.99□□□□□ -0.49
HUL4P40985 YPR064WYPR064W 420 nt11.99□□□□□ -0.49
HUL4P40985 MIC10YCL057C-A 294 nt11.99□□□□□ -0.49
HUL4P40985 AQY1YPR192W 918 nt11.98□□□□□ -0.49
HUL4P40985 HEM12YDR047W 1089 nt11.96□□□□□ -0.49
HUL4P40985 SNG1YGR197C 1644 nt11.96□□□□□ -0.5
HUL4P40985 SWE1YJL187C 2460 nt11.96□□□□□ -0.5
HUL4P40985 STB1YNL309W 1263 nt11.95□□□□□ -0.5
HUL4P40985 YDR524C-BYDR524C-B 201 nt11.94□□□□□ -0.5
HUL4P40985 TAD3YLR316C 969 nt11.93□□□□□ -0.5
HUL4P40985 YDL086C-AYDL086C-A 435 nt11.92□□□□□ -0.5
HUL4P40985 SPC25YER018C 666 nt11.91□□□□□ -0.5
HUL4P40985 PAU16YKL224C 372 nt11.91□□□□□ -0.5
HUL4P40985 tL(GAG)GtL(GAG)G 82 nt11.89□□□□□ -0.51
HUL4P40985 RRT5YFR032C 870 nt11.88□□□□□ -0.51
HUL4P40985 ANP1YEL036C 1503 nt11.87□□□□□ -0.51
HUL4P40985 CCT4YDL143W 1587 nt11.87□□□□□ -0.51
HUL4P40985 VPS60YDR486C 690 nt11.86□□□□□ -0.51
HUL4P40985 GPI16YHR188C 1833 nt11.86□□□□□ -0.51
HUL4P40985 FEN2YCR028C 1539 nt11.85□□□□□ -0.51
HUL4P40985 YHR056W-AYHR056W-A 435 nt11.83□□□□□ -0.52
HUL4P40985 ALG3YBL082C 1377 nt11.81□□□□□ -0.52
HUL4P40985 HSP60YLR259C 1719 nt11.81□□□□□ -0.52
HUL4P40985 SWC5YBR231C 912 nt11.81□□□□□ -0.52
HUL4P40985 YFR018CYFR018C 1092 nt11.8□□□□□ -0.52
HUL4P40985 BDH1YAL060W 1149 nt11.78□□□□□ -0.52
HUL4P40985 YIR016WYIR016W 798 nt11.74□□□□□ -0.53
HUL4P40985 RAX1YOR301W 1308 nt11.73□□□□□ -0.53
HUL4P40985 YLR415CYLR415C 339 nt11.72□□□□□ -0.53
HUL4P40985 UME6YDR207C 2511 nt11.7□□□□□ -0.54
HUL4P40985 BNA2YJR078W 1362 nt11.7□□□□□ -0.54
HUL4P40985 YSP3YOR003W 1437 nt11.69□□□□□ -0.54
HUL4P40985 GLK1YCL040W 1503 nt11.68□□□□□ -0.54
HUL4P40985 YFL066CYFL066C 1179 nt11.67□□□□□ -0.54
HUL4P40985 PRE6YOL038W 765 nt11.67□□□□□ -0.54
HUL4P40985 MIC12YBR262C 321 nt11.64□□□□□ -0.55
HUL4P40985 YNL115CYNL115C 1935 nt11.64□□□□□ -0.55
HUL4P40985 FUR4YBR021W 1902 nt11.64□□□□□ -0.55
HUL4P40985 PEX25YPL112C 1185 nt11.63□□□□□ -0.55
HUL4P40985 CCA1YER168C 1641 nt11.62□□□□□ -0.55
HUL4P40985 HHO1YPL127C 777 nt11.58□□□□□ -0.56
HUL4P40985 ALG12YNR030W 1656 nt11.57□□□□□ -0.56
HUL4P40985 NAT4YMR069W 858 nt11.57□□□□□ -0.56
HUL4P40985 XDJ1YLR090W 1380 nt11.55□□□□□ -0.56
HUL4P40985 AGP1YCL025C 1902 nt11.53□□□□□ -0.56
HUL4P40985 MCH5YOR306C 1566 nt11.53□□□□□ -0.56
HUL4P40985 SHM2YLR058C 1410 nt11.52□□□□□ -0.57
HUL4P40985 TIM17YJL143W 477 nt11.49□□□□□ -0.57
HUL4P40985 GDH3YAL062W 1374 nt11.49□□□□□ -0.57
HUL4P40985 YGR201CYGR201C 678 nt11.47□□□□□ -0.57
HUL4P40985 PRP4YPR178W 1398 nt11.46□□□□□ -0.57
HUL4P40985 DUT1YBR252W 444 nt11.46□□□□□ -0.57
HUL4P40985 AVT6YER119C 1347 nt11.43□□□□□ -0.58
HUL4P40985 VPS75YNL246W 795 nt11.43□□□□□ -0.58
HUL4P40985 DPS1YLL018C 1674 nt11.4□□□□□ -0.58
HUL4P40985 NIT1YIL164C 600 nt11.4□□□□□ -0.58
HUL4P40985 DUS1YML080W 1272 nt11.39□□□□□ -0.59
HUL4P40985 YMR244WYMR244W 1068 nt11.38□□□□□ -0.59
HUL4P40985 SGT2YOR007C 1041 nt11.38□□□□□ -0.59
HUL4P40985 AAC1YMR056C 930 nt11.37□□□□□ -0.59
HUL4P40985 GOR1YNL274C 1053 nt11.36□□□□□ -0.59
HUL4P40985 MSF1YPR047W 1410 nt11.35□□□□□ -0.59
HUL4P40985 PAU7YAR020C 168 nt11.32□□□□□ -0.6
HUL4P40985 YKR005CYKR005C 1578 nt11.32□□□□□ -0.6
HUL4P40985 MIR1YJR077C 936 nt11.31□□□□□ -0.6
HUL4P40985 NME1NME1 340 nt11.31□□□□□ -0.6
HUL4P40985 NAR1YNL240C 1476 nt11.29□□□□□ -0.6
HUL4P40985 SNF1YDR477W 1902 nt11.28□□□□□ -0.6
HUL4P40985 BIO5YNR056C 1686 nt11.27□□□□□ -0.6
HUL4P40985 YJL225CYJL225C 5277 nt11.27□□□□□ -0.61
HUL4P40985 BMT6YLR063W 1098 nt11.27□□□□□ -0.61
HUL4P40985 THI74YDR438W 1113 nt11.26□□□□□ -0.61
HUL4P40985 GLR1YPL091W 1452 nt11.25□□□□□ -0.61
HUL4P40985 RDN18-1RDN18-1 1800 nt11.25□□□□□ -0.61
HUL4P40985 RDN18-2RDN18-2 1800 nt11.25□□□□□ -0.61
HUL4P40985 YCL074WYCL074W 927 nt11.24□□□□□ -0.61
HUL4P40985 SHB17YKR043C 816 nt11.24□□□□□ -0.61
HUL4P40985 AQY2YLL052C 450 nt11.24□□□□□ -0.61
HUL4P40985 DAT1YML113W 747 nt11.24□□□□□ -0.61
HUL4P40985 STR3YGL184C 1398 nt11.24□□□□□ -0.61
HUL4P40985 YGR259CYGR259C 441 nt11.2□□□□□ -0.62
HUL4P40985 YDR010CYDR010C 333 nt11.19□□□□□ -0.62
HUL4P40985 YCR102CYCR102C 1107 nt11.18□□□□□ -0.62
HUL4P40985 RBG2YGR173W 1107 nt11.17□□□□□ -0.62
HUL4P40985 UBA4YHR111W 1323 nt11.16□□□□□ -0.62
HUL4P40985 PBP1YGR178C 2169 nt11.13□□□□□ -0.63
HUL4P40985 NBP35YGL091C 987 nt11.12□□□□□ -0.63
HUL4P40985 IRC24YIR036C 792 nt11.1□□□□□ -0.63
HUL4P40985 YSR3YKR053C 1215 nt11.1□□□□□ -0.63
HUL4P40985 PHO89YBR296C 1725 nt11.08□□□□□ -0.64
HUL4P40985 RET2YFR051C 1641 nt11.07□□□□□ -0.64
HUL4P40985 CYT2YKL087C 675 nt11.07□□□□□ -0.64
HUL4P40985 SHH4YLR164W 507 nt11.07□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms