Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 YFL067WYFL067W 528 nt12.02□□□□□ -0.49
RPN3P40016 SPC25YER018C 666 nt12.01□□□□□ -0.49
RPN3P40016 CRR1YLR213C 1269 nt12.01□□□□□ -0.49
RPN3P40016 STB1YNL309W 1263 nt12□□□□□ -0.49
RPN3P40016 DDR2YOL052C-A 186 nt12□□□□□ -0.49
RPN3P40016 YFR018CYFR018C 1092 nt11.99□□□□□ -0.49
RPN3P40016 LYS4YDR234W 2082 nt11.98□□□□□ -0.49
RPN3P40016 YDL086C-AYDL086C-A 435 nt11.95□□□□□ -0.5
RPN3P40016 YDR524C-BYDR524C-B 201 nt11.95□□□□□ -0.5
RPN3P40016 CCT4YDL143W 1587 nt11.95□□□□□ -0.5
RPN3P40016 GPI16YHR188C 1833 nt11.93□□□□□ -0.5
RPN3P40016 BDH1YAL060W 1149 nt11.92□□□□□ -0.5
RPN3P40016 HEM12YDR047W 1089 nt11.9□□□□□ -0.5
RPN3P40016 ANP1YEL036C 1503 nt11.9□□□□□ -0.5
RPN3P40016 SNG1YGR197C 1644 nt11.89□□□□□ -0.51
RPN3P40016 YFL015W-AYFL015W-A 318 nt11.89□□□□□ -0.51
RPN3P40016 VPS60YDR486C 690 nt11.88□□□□□ -0.51
RPN3P40016 PTK1YKL198C 1989 nt11.88□□□□□ -0.51
RPN3P40016 YSP3YOR003W 1437 nt11.87□□□□□ -0.51
RPN3P40016 FEN2YCR028C 1539 nt11.87□□□□□ -0.51
RPN3P40016 PRE6YOL038W 765 nt11.87□□□□□ -0.51
RPN3P40016 MIC10YCL057C-A 294 nt11.87□□□□□ -0.51
RPN3P40016 RRT5YFR032C 870 nt11.86□□□□□ -0.51
RPN3P40016 PAU16YKL224C 372 nt11.86□□□□□ -0.51
RPN3P40016 YLR415CYLR415C 339 nt11.86□□□□□ -0.51
RPN3P40016 SWC5YBR231C 912 nt11.85□□□□□ -0.51
RPN3P40016 PEX25YPL112C 1185 nt11.84□□□□□ -0.51
RPN3P40016 ALG3YBL082C 1377 nt11.83□□□□□ -0.52
RPN3P40016 YFL066CYFL066C 1179 nt11.82□□□□□ -0.52
RPN3P40016 YNL115CYNL115C 1935 nt11.79□□□□□ -0.52
RPN3P40016 YJL225CYJL225C 5277 nt11.78□□□□□ -0.52
RPN3P40016 YIR016WYIR016W 798 nt11.76□□□□□ -0.53
RPN3P40016 YHR056W-AYHR056W-A 435 nt11.73□□□□□ -0.53
RPN3P40016 SPT8YLR055C 1809 nt11.7□□□□□ -0.54
RPN3P40016 YFL054CYFL054C 1941 nt11.68□□□□□ -0.54
RPN3P40016 VPS75YNL246W 795 nt11.66□□□□□ -0.54
RPN3P40016 RAX1YOR301W 1308 nt11.65□□□□□ -0.54
RPN3P40016 BNA2YJR078W 1362 nt11.64□□□□□ -0.55
RPN3P40016 MIC12YBR262C 321 nt11.63□□□□□ -0.55
RPN3P40016 TIM17YJL143W 477 nt11.59□□□□□ -0.55
RPN3P40016 XDJ1YLR090W 1380 nt11.56□□□□□ -0.56
RPN3P40016 NAT4YMR069W 858 nt11.56□□□□□ -0.56
RPN3P40016 MIR1YJR077C 936 nt11.55□□□□□ -0.56
RPN3P40016 GLK1YCL040W 1503 nt11.55□□□□□ -0.56
RPN3P40016 SHM2YLR058C 1410 nt11.54□□□□□ -0.56
RPN3P40016 HHO1YPL127C 777 nt11.52□□□□□ -0.57
RPN3P40016 RDN37-1RDN37-1 5354 nt11.51□□□□□ -0.57
RPN3P40016 RDN37-2RDN37-2 5354 nt11.51□□□□□ -0.57
RPN3P40016 YGR201CYGR201C 678 nt11.5□□□□□ -0.57
RPN3P40016 THI74YDR438W 1113 nt11.49□□□□□ -0.57
RPN3P40016 GDH3YAL062W 1374 nt11.49□□□□□ -0.57
RPN3P40016 MSF1YPR047W 1410 nt11.48□□□□□ -0.57
RPN3P40016 PAU7YAR020C 168 nt11.46□□□□□ -0.57
RPN3P40016 NIT1YIL164C 600 nt11.45□□□□□ -0.58
RPN3P40016 SWE1YJL187C 2460 nt11.43□□□□□ -0.58
RPN3P40016 SBA1YKL117W 651 nt11.43□□□□□ -0.58
RPN3P40016 SGT2YOR007C 1041 nt11.42□□□□□ -0.58
RPN3P40016 CCA1YER168C 1641 nt11.42□□□□□ -0.58
RPN3P40016 AVT6YER119C 1347 nt11.38□□□□□ -0.59
RPN3P40016 DAT1YML113W 747 nt11.38□□□□□ -0.59
RPN3P40016 PAC11YDR488C 1602 nt11.38□□□□□ -0.59
RPN3P40016 SHB17YKR043C 816 nt11.37□□□□□ -0.59
RPN3P40016 AGP1YCL025C 1902 nt11.37□□□□□ -0.59
RPN3P40016 UBA4YHR111W 1323 nt11.36□□□□□ -0.59
RPN3P40016 YDR010CYDR010C 333 nt11.33□□□□□ -0.6
RPN3P40016 GOR1YNL274C 1053 nt11.33□□□□□ -0.6
RPN3P40016 NVJ2YPR091C 2313 nt11.32□□□□□ -0.6
RPN3P40016 DUT1YBR252W 444 nt11.3□□□□□ -0.6
RPN3P40016 YGL034CYGL034C 366 nt11.29□□□□□ -0.6
RPN3P40016 YSR3YKR053C 1215 nt11.28□□□□□ -0.6
RPN3P40016 RET2YFR051C 1641 nt11.25□□□□□ -0.61
RPN3P40016 YCR102CYCR102C 1107 nt11.24□□□□□ -0.61
RPN3P40016 XYL2YLR070C 1071 nt11.21□□□□□ -0.61
RPN3P40016 PHO89YBR296C 1725 nt11.21□□□□□ -0.62
RPN3P40016 NME1NME1 340 nt11.19□□□□□ -0.62
RPN3P40016 YCR087WYCR087W 516 nt11.17□□□□□ -0.62
RPN3P40016 DUS1YML080W 1272 nt11.17□□□□□ -0.62
RPN3P40016 NBP35YGL091C 987 nt11.14□□□□□ -0.63
RPN3P40016 STR3YGL184C 1398 nt11.14□□□□□ -0.63
RPN3P40016 SFA1YDL168W 1161 nt11.12□□□□□ -0.63
RPN3P40016 NDI1YML120C 1542 nt11.11□□□□□ -0.63
RPN3P40016 YCL074WYCL074W 927 nt11.11□□□□□ -0.63
RPN3P40016 RBG1YAL036C 1110 nt11.11□□□□□ -0.63
RPN3P40016 YMR244WYMR244W 1068 nt11.11□□□□□ -0.63
RPN3P40016 AIM45YPR004C 1035 nt11.11□□□□□ -0.63
RPN3P40016 GLR1YPL091W 1452 nt11.09□□□□□ -0.63
RPN3P40016 RDN18-1RDN18-1 1800 nt11.09□□□□□ -0.63
RPN3P40016 RDN18-2RDN18-2 1800 nt11.09□□□□□ -0.63
RPN3P40016 MRP20YDR405W 792 nt11.08□□□□□ -0.64
RPN3P40016 COQ2YNR041C 1119 nt11.08□□□□□ -0.64
RPN3P40016 TIR3YIL011W 810 nt11.07□□□□□ -0.64
RPN3P40016 AQY2YLL052C 450 nt11.07□□□□□ -0.64
RPN3P40016 YHL019W-AYHL019W-A 594 nt11.06□□□□□ -0.64
RPN3P40016 FUR4YBR021W 1902 nt11.05□□□□□ -0.64
RPN3P40016 SHH4YLR164W 507 nt11.04□□□□□ -0.64
RPN3P40016 YGR139WYGR139W 339 nt11□□□□□ -0.65
RPN3P40016 LSC2YGR244C 1284 nt10.97□□□□□ -0.65
RPN3P40016 POM34YLR018C 900 nt10.97□□□□□ -0.65
RPN3P40016 RPL4BYDR012W 1089 nt10.96□□□□□ -0.65
RPN3P40016 RPL4AYBR031W 1089 nt10.96□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 129.6 ms