Protein–RNA interactions for Protein: P40003

VAB2, Biogenesis of lysosome-related organelles complex 1 subunit VAB2, yeastyeast

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAB2P40003 THI74YDR438W 1113 nt12.31□□□□□ -0.44
VAB2P40003 TRM5YHR070W 1500 nt12.29□□□□□ -0.44
VAB2P40003 STB1YNL309W 1263 nt12.29□□□□□ -0.44
VAB2P40003 CCT4YDL143W 1587 nt12.29□□□□□ -0.44
VAB2P40003 SPC25YER018C 666 nt12.28□□□□□ -0.44
VAB2P40003 MIR1YJR077C 936 nt12.26□□□□□ -0.45
VAB2P40003 RRT12YCR045C 1476 nt12.26□□□□□ -0.45
VAB2P40003 GPI16YHR188C 1833 nt12.25□□□□□ -0.45
VAB2P40003 VPS75YNL246W 795 nt12.25□□□□□ -0.45
VAB2P40003 YDR524C-BYDR524C-B 201 nt12.24□□□□□ -0.45
VAB2P40003 DDR2YOL052C-A 186 nt12.24□□□□□ -0.45
VAB2P40003 SWC5YBR231C 912 nt12.24□□□□□ -0.45
VAB2P40003 YMR244WYMR244W 1068 nt12.21□□□□□ -0.45
VAB2P40003 YFL067WYFL067W 528 nt12.19□□□□□ -0.46
VAB2P40003 VPS60YDR486C 690 nt12.16□□□□□ -0.46
VAB2P40003 PAU7YAR020C 168 nt12.15□□□□□ -0.46
VAB2P40003 ERF2YLR246W 1080 nt12.15□□□□□ -0.46
VAB2P40003 GLR1YPL091W 1452 nt12.14□□□□□ -0.47
VAB2P40003 ATF2YGR177C 1608 nt12.14□□□□□ -0.47
VAB2P40003 YDL086C-AYDL086C-A 435 nt12.12□□□□□ -0.47
VAB2P40003 DAT1YML113W 747 nt12.12□□□□□ -0.47
VAB2P40003 SPT8YLR055C 1809 nt12.11□□□□□ -0.47
VAB2P40003 YHL050CYHL050C 2094 nt12.1□□□□□ -0.47
VAB2P40003 FEN2YCR028C 1539 nt12.09□□□□□ -0.47
VAB2P40003 ALG3YBL082C 1377 nt12.07□□□□□ -0.48
VAB2P40003 YGL034CYGL034C 366 nt12.06□□□□□ -0.48
VAB2P40003 ANP1YEL036C 1503 nt12.04□□□□□ -0.48
VAB2P40003 CRR1YLR213C 1269 nt12.03□□□□□ -0.48
VAB2P40003 TIM17YJL143W 477 nt12.02□□□□□ -0.49
VAB2P40003 RBG2YGR173W 1107 nt12.01□□□□□ -0.49
VAB2P40003 UBA4YHR111W 1323 nt12.01□□□□□ -0.49
VAB2P40003 NDI1YML120C 1542 nt11.98□□□□□ -0.49
VAB2P40003 YSR3YKR053C 1215 nt11.97□□□□□ -0.49
VAB2P40003 YIR016WYIR016W 798 nt11.96□□□□□ -0.49
VAB2P40003 BDF1YLR399C 2061 nt11.95□□□□□ -0.5
VAB2P40003 SEC11YIR022W 504 nt11.95□□□□□ -0.5
VAB2P40003 SNG1YGR197C 1644 nt11.94□□□□□ -0.5
VAB2P40003 HEM12YDR047W 1089 nt11.94□□□□□ -0.5
VAB2P40003 SHB17YKR043C 816 nt11.94□□□□□ -0.5
VAB2P40003 RBG1YAL036C 1110 nt11.91□□□□□ -0.5
VAB2P40003 XYL2YLR070C 1071 nt11.88□□□□□ -0.51
VAB2P40003 YCR087WYCR087W 516 nt11.86□□□□□ -0.51
VAB2P40003 SHM2YLR058C 1410 nt11.86□□□□□ -0.51
VAB2P40003 YMR226CYMR226C 804 nt11.85□□□□□ -0.51
VAB2P40003 MIC10YCL057C-A 294 nt11.85□□□□□ -0.51
VAB2P40003 YDR010CYDR010C 333 nt11.81□□□□□ -0.52
VAB2P40003 XDJ1YLR090W 1380 nt11.79□□□□□ -0.52
VAB2P40003 LYS4YDR234W 2082 nt11.79□□□□□ -0.52
VAB2P40003 PHO89YBR296C 1725 nt11.78□□□□□ -0.52
VAB2P40003 TAT1YBR069C 1860 nt11.78□□□□□ -0.52
VAB2P40003 RET2YFR051C 1641 nt11.78□□□□□ -0.52
VAB2P40003 SGT2YOR007C 1041 nt11.77□□□□□ -0.53
VAB2P40003 AIM45YPR004C 1035 nt11.77□□□□□ -0.53
VAB2P40003 BNA2YJR078W 1362 nt11.77□□□□□ -0.53
VAB2P40003 NCP1YHR042W 2076 nt11.76□□□□□ -0.53
VAB2P40003 NIT1YIL164C 600 nt11.73□□□□□ -0.53
VAB2P40003 GDH3YAL062W 1374 nt11.72□□□□□ -0.53
VAB2P40003 SAM1YLR180W 1149 nt11.72□□□□□ -0.53
VAB2P40003 PCH2YBR186W 1695 nt11.71□□□□□ -0.53
VAB2P40003 MRP20YDR405W 792 nt11.7□□□□□ -0.54
VAB2P40003 YLR111WYLR111W 333 nt11.66□□□□□ -0.54
VAB2P40003 BOP3YNL042W 1191 nt11.66□□□□□ -0.54
VAB2P40003 MIC12YBR262C 321 nt11.66□□□□□ -0.54
VAB2P40003 YGR201CYGR201C 678 nt11.63□□□□□ -0.55
VAB2P40003 YHR056W-AYHR056W-A 435 nt11.61□□□□□ -0.55
VAB2P40003 HHO1YPL127C 777 nt11.61□□□□□ -0.55
VAB2P40003 GUT2YIL155C 1950 nt11.59□□□□□ -0.55
VAB2P40003 RAX1YOR301W 1308 nt11.59□□□□□ -0.55
VAB2P40003 COQ2YNR041C 1119 nt11.58□□□□□ -0.56
VAB2P40003 RTF1YGL244W 1677 nt11.56□□□□□ -0.56
VAB2P40003 AVT6YER119C 1347 nt11.56□□□□□ -0.56
VAB2P40003 RPL4BYDR012W 1089 nt11.51□□□□□ -0.57
VAB2P40003 GOR1YNL274C 1053 nt11.51□□□□□ -0.57
VAB2P40003 SDH5YOL071W 489 nt11.51□□□□□ -0.57
VAB2P40003 RPL4AYBR031W 1089 nt11.51□□□□□ -0.57
VAB2P40003 YCR102CYCR102C 1107 nt11.49□□□□□ -0.57
VAB2P40003 CLB6YGR109C 1143 nt11.49□□□□□ -0.57
VAB2P40003 SFA1YDL168W 1161 nt11.47□□□□□ -0.57
VAB2P40003 RAD23YEL037C 1197 nt11.45□□□□□ -0.58
VAB2P40003 YHL019W-AYHL019W-A 594 nt11.45□□□□□ -0.58
VAB2P40003 RPM1RPM1 483 nt11.44□□□□□ -0.58
VAB2P40003 RAD51YER095W 1203 nt11.41□□□□□ -0.58
VAB2P40003 RPS14BYJL191W 417 nt11.4□□□□□ -0.58
VAB2P40003 PIB2YGL023C 1908 nt11.39□□□□□ -0.59
VAB2P40003 UTH1YKR042W 1098 nt11.37□□□□□ -0.59
VAB2P40003 STE4YOR212W 1272 nt11.37□□□□□ -0.59
VAB2P40003 YLR437C-AYLR437C-A 228 nt11.34□□□□□ -0.59
VAB2P40003 YNR029CYNR029C 1290 nt11.34□□□□□ -0.59
VAB2P40003 TSC10YBR265W 963 nt11.33□□□□□ -0.6
VAB2P40003 PTK1YKL198C 1989 nt11.32□□□□□ -0.6
VAB2P40003 TIR3YIL011W 810 nt11.3□□□□□ -0.6
VAB2P40003 RIB3YDR487C 627 nt11.29□□□□□ -0.6
VAB2P40003 YGR012WYGR012W 1182 nt11.29□□□□□ -0.6
VAB2P40003 YLR349WYLR349W 507 nt11.29□□□□□ -0.6
VAB2P40003 NVJ2YPR091C 2313 nt11.28□□□□□ -0.6
VAB2P40003 FUN14YAL008W 597 nt11.28□□□□□ -0.6
VAB2P40003 YJL225CYJL225C 5277 nt11.28□□□□□ -0.6
VAB2P40003 DUT1YBR252W 444 nt11.27□□□□□ -0.61
VAB2P40003 ADH7YCR105W 1086 nt11.26□□□□□ -0.61
VAB2P40003 YFL054CYFL054C 1941 nt11.25□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms