Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 BI2Q0110 1272 nt13.26□□□□□ -0.29
UBP9P39967 YAL016C-BYAL016C-B 186 nt13.25□□□□□ -0.29
UBP9P39967 CUE1YMR264W 612 nt13.25□□□□□ -0.29
UBP9P39967 YMR090WYMR090W 684 nt13.23□□□□□ -0.29
UBP9P39967 GIS3YLR094C 1509 nt13.23□□□□□ -0.29
UBP9P39967 YIL030W-AYIL030W-A 339 nt13.2□□□□□ -0.3
UBP9P39967 FMT1YBL013W 1206 nt13.19□□□□□ -0.3
UBP9P39967 UBX6YJL048C 1191 nt13.18□□□□□ -0.3
UBP9P39967 HUA1YGR268C 597 nt13.15□□□□□ -0.3
UBP9P39967 YCL042WYCL042W 360 nt13.15□□□□□ -0.3
UBP9P39967 YLR122CYLR122C 378 nt13.14□□□□□ -0.31
UBP9P39967 NUF2YOL069W 1356 nt13.13□□□□□ -0.31
UBP9P39967 SOR2YDL246C 1074 nt13.13□□□□□ -0.31
UBP9P39967 SCEIQ0160 708 nt13.13□□□□□ -0.31
UBP9P39967 SOR1YJR159W 1074 nt13.13□□□□□ -0.31
UBP9P39967 PTH1YHR189W 573 nt13.12□□□□□ -0.31
UBP9P39967 TGS1YPL157W 948 nt13.11□□□□□ -0.31
UBP9P39967 RER1YCL001W 567 nt13.11□□□□□ -0.31
UBP9P39967 SDH1YKL148C 1923 nt13.09□□□□□ -0.31
UBP9P39967 SKI6YGR195W 741 nt13.08□□□□□ -0.32
UBP9P39967 YIL100WYIL100W 354 nt13.08□□□□□ -0.32
UBP9P39967 YLR283WYLR283W 945 nt13.08□□□□□ -0.32
UBP9P39967 SCC4YER147C 1875 nt13.07□□□□□ -0.32
UBP9P39967 FMP52YER004W 696 nt13.05□□□□□ -0.32
UBP9P39967 FTR1YER145C 1215 nt13.03□□□□□ -0.32
UBP9P39967 YHR028W-AYHR028W-A 321 nt13.03□□□□□ -0.32
UBP9P39967 YLR235CYLR235C 399 nt13.03□□□□□ -0.32
UBP9P39967 YBR220CYBR220C 1683 nt13.02□□□□□ -0.32
UBP9P39967 YKL030WYKL030W 606 nt13.02□□□□□ -0.33
UBP9P39967 CWP1YKL096W 720 nt13.02□□□□□ -0.33
UBP9P39967 FIP1YJR093C 984 nt13.01□□□□□ -0.33
UBP9P39967 YMR144WYMR144W 1029 nt12.99□□□□□ -0.33
UBP9P39967 IDI1YPL117C 867 nt12.99□□□□□ -0.33
UBP9P39967 ADH2YMR303C 1047 nt12.98□□□□□ -0.33
UBP9P39967 YDR094WYDR094W 336 nt12.97□□□□□ -0.33
UBP9P39967 LCB1YMR296C 1677 nt12.96□□□□□ -0.33
UBP9P39967 RUF21RUF21 707 nt12.92□□□□□ -0.34
UBP9P39967 YEL009C-AYEL009C-A 408 nt12.91□□□□□ -0.34
UBP9P39967 PCM1YEL058W 1674 nt12.89□□□□□ -0.35
UBP9P39967 YNL040WYNL040W 1371 nt12.87□□□□□ -0.35
UBP9P39967 ERV29YGR284C 933 nt12.87□□□□□ -0.35
UBP9P39967 ARC19YKL013C 516 nt12.87□□□□□ -0.35
UBP9P39967 SNF6YHL025W 999 nt12.85□□□□□ -0.35
UBP9P39967 MCT1YOR221C 1083 nt12.85□□□□□ -0.35
UBP9P39967 YLR036CYLR036C 612 nt12.84□□□□□ -0.35
UBP9P39967 ZTA1YBR046C 1005 nt12.84□□□□□ -0.35
UBP9P39967 DIC1YLR348C 897 nt12.83□□□□□ -0.36
UBP9P39967 TIM23YNR017W 669 nt12.82□□□□□ -0.36
UBP9P39967 RAD17YOR368W 1206 nt12.82□□□□□ -0.36
UBP9P39967 ARP6YLR085C 1317 nt12.82□□□□□ -0.36
UBP9P39967 LSM12YHR121W 564 nt12.81□□□□□ -0.36
UBP9P39967 CCE1YKL011C 1062 nt12.81□□□□□ -0.36
UBP9P39967 DCI1YOR180C 816 nt12.81□□□□□ -0.36
UBP9P39967 VPS28YPL065W 729 nt12.8□□□□□ -0.36
UBP9P39967 CBS1YDL069C 690 nt12.79□□□□□ -0.36
UBP9P39967 YNL195CYNL195C 786 nt12.79□□□□□ -0.36
UBP9P39967 UBC12YLR306W 567 nt12.78□□□□□ -0.36
UBP9P39967 BDF1YLR399C 2061 nt12.77□□□□□ -0.36
UBP9P39967 YPR1YDR368W 939 nt12.77□□□□□ -0.37
UBP9P39967 SUT1YGL162W 900 nt12.77□□□□□ -0.37
UBP9P39967 YGR011WYGR011W 327 nt12.76□□□□□ -0.37
UBP9P39967 YAL026C-AYAL026C-A 438 nt12.76□□□□□ -0.37
UBP9P39967 YPL071CYPL071C 471 nt12.76□□□□□ -0.37
UBP9P39967 RRT12YCR045C 1476 nt12.76□□□□□ -0.37
UBP9P39967 YFL015W-AYFL015W-A 318 nt12.75□□□□□ -0.37
UBP9P39967 MPS2YGL075C 1164 nt12.75□□□□□ -0.37
UBP9P39967 RNQ1YCL028W 1218 nt12.75□□□□□ -0.37
UBP9P39967 YHR145CYHR145C 357 nt12.74□□□□□ -0.37
UBP9P39967 YLR179CYLR179C 606 nt12.74□□□□□ -0.37
UBP9P39967 YIH1YCR059C 777 nt12.73□□□□□ -0.37
UBP9P39967 TSR2YLR435W 618 nt12.71□□□□□ -0.37
UBP9P39967 tL(GAG)GtL(GAG)G 82 nt12.7□□□□□ -0.38
UBP9P39967 COX3Q0275 810 nt12.7□□□□□ -0.38
UBP9P39967 ECM9YKR004C 1134 nt12.7□□□□□ -0.38
UBP9P39967 RSA3YLR221C 663 nt12.7□□□□□ -0.38
UBP9P39967 YSC84YHR016C 1407 nt12.7□□□□□ -0.38
UBP9P39967 tR(UCU)Q1tR(UCU)Q1 73 nt12.67□□□□□ -0.38
UBP9P39967 YHL050CYHL050C 2094 nt12.66□□□□□ -0.38
UBP9P39967 HMRA1YCR097W 381 nt12.66□□□□□ -0.38
UBP9P39967 YPR064WYPR064W 420 nt12.66□□□□□ -0.38
UBP9P39967 TAZ1YPR140W 1146 nt12.66□□□□□ -0.38
UBP9P39967 WSC2YNL283C 1512 nt12.64□□□□□ -0.39
UBP9P39967 CHA1YCL064C 1083 nt12.64□□□□□ -0.39
UBP9P39967 YPR027CYPR027C 834 nt12.64□□□□□ -0.39
UBP9P39967 YML079WYML079W 606 nt12.63□□□□□ -0.39
UBP9P39967 YFR018CYFR018C 1092 nt12.62□□□□□ -0.39
UBP9P39967 YLL053CYLL053C 459 nt12.62□□□□□ -0.39
UBP9P39967 SET6YPL165C 1122 nt12.62□□□□□ -0.39
UBP9P39967 YHR054CYHR054C 1065 nt12.61□□□□□ -0.39
UBP9P39967 AHT1YHR093W 549 nt12.61□□□□□ -0.39
UBP9P39967 TAD3YLR316C 969 nt12.61□□□□□ -0.39
UBP9P39967 BIO4YNR057C 714 nt12.61□□□□□ -0.39
UBP9P39967 VHS2YIL135C 1311 nt12.61□□□□□ -0.39
UBP9P39967 TAT1YBR069C 1860 nt12.59□□□□□ -0.39
UBP9P39967 YEL074WYEL074W 339 nt12.58□□□□□ -0.4
UBP9P39967 MOB1YIL106W 945 nt12.58□□□□□ -0.4
UBP9P39967 SIM1YIL123W 1431 nt12.58□□□□□ -0.4
UBP9P39967 PAU16YKL224C 372 nt12.58□□□□□ -0.4
UBP9P39967 RPN8YOR261C 1017 nt12.57□□□□□ -0.4
UBP9P39967 SUT2YPR009W 807 nt12.57□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 42.3 ms