Protein–RNA interactions for Protein: P39705

NUP60, Nucleoporin NUP60, yeastyeast

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP60P39705 YLL053CYLL053C 459 nt11.37□□□□□ -0.59
NUP60P39705 BIO4YNR057C 714 nt11.36□□□□□ -0.59
NUP60P39705 SIM1YIL123W 1431 nt11.35□□□□□ -0.59
NUP60P39705 PRE6YOL038W 765 nt11.34□□□□□ -0.59
NUP60P39705 AQY1YPR192W 918 nt11.34□□□□□ -0.59
NUP60P39705 FTR1YER145C 1215 nt11.32□□□□□ -0.6
NUP60P39705 YFL054CYFL054C 1941 nt11.29□□□□□ -0.6
NUP60P39705 GAL1YBR020W 1587 nt11.28□□□□□ -0.6
NUP60P39705 SPT8YLR055C 1809 nt11.28□□□□□ -0.6
NUP60P39705 NCP1YHR042W 2076 nt11.28□□□□□ -0.6
NUP60P39705 TRM5YHR070W 1500 nt11.25□□□□□ -0.61
NUP60P39705 PEX25YPL112C 1185 nt11.23□□□□□ -0.61
NUP60P39705 ALG12YNR030W 1656 nt11.23□□□□□ -0.61
NUP60P39705 YFL066CYFL066C 1179 nt11.22□□□□□ -0.61
NUP60P39705 BDH1YAL060W 1149 nt11.2□□□□□ -0.62
NUP60P39705 STB1YNL309W 1263 nt11.2□□□□□ -0.62
NUP60P39705 YJL225CYJL225C 5277 nt11.19□□□□□ -0.62
NUP60P39705 HSP60YLR259C 1719 nt11.19□□□□□ -0.62
NUP60P39705 SPC25YER018C 666 nt11.19□□□□□ -0.62
NUP60P39705 YLR415CYLR415C 339 nt11.18□□□□□ -0.62
NUP60P39705 DDR2YOL052C-A 186 nt11.18□□□□□ -0.62
NUP60P39705 YSP3YOR003W 1437 nt11.18□□□□□ -0.62
NUP60P39705 SBA1YKL117W 651 nt11.17□□□□□ -0.62
NUP60P39705 ERF2YLR246W 1080 nt11.17□□□□□ -0.62
NUP60P39705 CCT4YDL143W 1587 nt11.16□□□□□ -0.62
NUP60P39705 YDR524C-BYDR524C-B 201 nt11.16□□□□□ -0.62
NUP60P39705 YFL067WYFL067W 528 nt11.16□□□□□ -0.62
NUP60P39705 ATF2YGR177C 1608 nt11.16□□□□□ -0.62
NUP60P39705 GPI16YHR188C 1833 nt11.15□□□□□ -0.62
NUP60P39705 YNL115CYNL115C 1935 nt11.15□□□□□ -0.62
NUP60P39705 SWC5YBR231C 912 nt11.11□□□□□ -0.63
NUP60P39705 CRR1YLR213C 1269 nt11.1□□□□□ -0.63
NUP60P39705 NAT4YMR069W 858 nt11.1□□□□□ -0.63
NUP60P39705 YDL086C-AYDL086C-A 435 nt11.09□□□□□ -0.63
NUP60P39705 VPS60YDR486C 690 nt11.09□□□□□ -0.63
NUP60P39705 GLK1YCL040W 1503 nt11.06□□□□□ -0.64
NUP60P39705 FEN2YCR028C 1539 nt11.04□□□□□ -0.64
NUP60P39705 ANP1YEL036C 1503 nt11.04□□□□□ -0.64
NUP60P39705 ALG3YBL082C 1377 nt11.03□□□□□ -0.64
NUP60P39705 VPS75YNL246W 795 nt11.01□□□□□ -0.65
NUP60P39705 SWE1YJL187C 2460 nt11□□□□□ -0.65
NUP60P39705 SNG1YGR197C 1644 nt11□□□□□ -0.65
NUP60P39705 HEM12YDR047W 1089 nt11□□□□□ -0.65
NUP60P39705 MSF1YPR047W 1410 nt10.98□□□□□ -0.65
NUP60P39705 MIR1YJR077C 936 nt10.97□□□□□ -0.65
NUP60P39705 LYS4YDR234W 2082 nt10.96□□□□□ -0.65
NUP60P39705 THI74YDR438W 1113 nt10.96□□□□□ -0.65
NUP60P39705 MIC10YCL057C-A 294 nt10.95□□□□□ -0.66
NUP60P39705 YIR016WYIR016W 798 nt10.94□□□□□ -0.66
NUP60P39705 NAR1YNL240C 1476 nt10.89□□□□□ -0.67
NUP60P39705 TIM17YJL143W 477 nt10.88□□□□□ -0.67
NUP60P39705 PAU7YAR020C 168 nt10.88□□□□□ -0.67
NUP60P39705 RDN37-1RDN37-1 5354 nt10.88□□□□□ -0.67
NUP60P39705 RDN37-2RDN37-2 5354 nt10.88□□□□□ -0.67
NUP60P39705 DAT1YML113W 747 nt10.83□□□□□ -0.68
NUP60P39705 BNA2YJR078W 1362 nt10.81□□□□□ -0.68
NUP60P39705 SHM2YLR058C 1410 nt10.79□□□□□ -0.68
NUP60P39705 YHR056W-AYHR056W-A 435 nt10.78□□□□□ -0.68
NUP60P39705 UBA4YHR111W 1323 nt10.78□□□□□ -0.68
NUP60P39705 XDJ1YLR090W 1380 nt10.77□□□□□ -0.68
NUP60P39705 YGL034CYGL034C 366 nt10.75□□□□□ -0.69
NUP60P39705 SHB17YKR043C 816 nt10.75□□□□□ -0.69
NUP60P39705 FUR4YBR021W 1902 nt10.75□□□□□ -0.69
NUP60P39705 MIC12YBR262C 321 nt10.74□□□□□ -0.69
NUP60P39705 YMR244WYMR244W 1068 nt10.73□□□□□ -0.69
NUP60P39705 AAC1YMR056C 930 nt10.72□□□□□ -0.69
NUP60P39705 RAX1YOR301W 1308 nt10.72□□□□□ -0.69
NUP60P39705 YSR3YKR053C 1215 nt10.71□□□□□ -0.69
NUP60P39705 SGT2YOR007C 1041 nt10.71□□□□□ -0.69
NUP60P39705 GDH3YAL062W 1374 nt10.7□□□□□ -0.7
NUP60P39705 GLR1YPL091W 1452 nt10.69□□□□□ -0.7
NUP60P39705 NIT1YIL164C 600 nt10.69□□□□□ -0.7
NUP60P39705 PRP4YPR178W 1398 nt10.67□□□□□ -0.7
NUP60P39705 YDR010CYDR010C 333 nt10.67□□□□□ -0.7
NUP60P39705 YGR201CYGR201C 678 nt10.67□□□□□ -0.7
NUP60P39705 HHO1YPL127C 777 nt10.66□□□□□ -0.7
NUP60P39705 XYL2YLR070C 1071 nt10.64□□□□□ -0.71
NUP60P39705 PBP1YGR178C 2169 nt10.64□□□□□ -0.71
NUP60P39705 NDI1YML120C 1542 nt10.63□□□□□ -0.71
NUP60P39705 DPS1YLL018C 1674 nt10.63□□□□□ -0.71
NUP60P39705 BIO5YNR056C 1686 nt10.63□□□□□ -0.71
NUP60P39705 HSL7YBR133C 2484 nt10.62□□□□□ -0.71
NUP60P39705 RET2YFR051C 1641 nt10.62□□□□□ -0.71
NUP60P39705 YCR087WYCR087W 516 nt10.61□□□□□ -0.71
NUP60P39705 RBG1YAL036C 1110 nt10.61□□□□□ -0.71
NUP60P39705 PHO89YBR296C 1725 nt10.6□□□□□ -0.71
NUP60P39705 CMP2YML057W 1815 nt10.6□□□□□ -0.71
NUP60P39705 CYT2YKL087C 675 nt10.59□□□□□ -0.71
NUP60P39705 AVT6YER119C 1347 nt10.58□□□□□ -0.71
NUP60P39705 AIM45YPR004C 1035 nt10.55□□□□□ -0.72
NUP60P39705 RBG2YGR173W 1107 nt10.54□□□□□ -0.72
NUP60P39705 GOR1YNL274C 1053 nt10.54□□□□□ -0.72
NUP60P39705 SNF1YDR477W 1902 nt10.54□□□□□ -0.72
NUP60P39705 CCA1YER168C 1641 nt10.54□□□□□ -0.72
NUP60P39705 MRP20YDR405W 792 nt10.5□□□□□ -0.73
NUP60P39705 YCR102CYCR102C 1107 nt10.48□□□□□ -0.73
NUP60P39705 BMT6YLR063W 1098 nt10.48□□□□□ -0.73
NUP60P39705 YMR226CYMR226C 804 nt10.45□□□□□ -0.74
NUP60P39705 COQ2YNR041C 1119 nt10.45□□□□□ -0.74
NUP60P39705 AGP1YCL025C 1902 nt10.45□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 72.6 ms