Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 STB1YNL309W 1263 nt13.28□□□□□ -0.28
UBP12P39538 DDR2YOL052C-A 186 nt13.27□□□□□ -0.29
UBP12P39538 PAU16YKL224C 372 nt13.25□□□□□ -0.29
UBP12P39538 YDR524C-BYDR524C-B 201 nt13.24□□□□□ -0.29
UBP12P39538 SPC25YER018C 666 nt13.24□□□□□ -0.29
UBP12P39538 YFL066CYFL066C 1179 nt13.23□□□□□ -0.29
UBP12P39538 YFL067WYFL067W 528 nt13.23□□□□□ -0.29
UBP12P39538 CRR1YLR213C 1269 nt13.23□□□□□ -0.29
UBP12P39538 BOP3YNL042W 1191 nt13.23□□□□□ -0.29
UBP12P39538 PIB2YGL023C 1908 nt13.23□□□□□ -0.29
UBP12P39538 RTF1YGL244W 1677 nt13.22□□□□□ -0.29
UBP12P39538 BDH1YAL060W 1149 nt13.22□□□□□ -0.29
UBP12P39538 CCT4YDL143W 1587 nt13.22□□□□□ -0.29
UBP12P39538 LYS4YDR234W 2082 nt13.2□□□□□ -0.3
UBP12P39538 YDL086C-AYDL086C-A 435 nt13.19□□□□□ -0.3
UBP12P39538 RRT5YFR032C 870 nt13.19□□□□□ -0.3
UBP12P39538 GPI16YHR188C 1833 nt13.17□□□□□ -0.3
UBP12P39538 YSP3YOR003W 1437 nt13.16□□□□□ -0.3
UBP12P39538 VPS60YDR486C 690 nt13.16□□□□□ -0.3
UBP12P39538 SNG1YGR197C 1644 nt13.14□□□□□ -0.31
UBP12P39538 YLR415CYLR415C 339 nt13.14□□□□□ -0.31
UBP12P39538 MIC10YCL057C-A 294 nt13.14□□□□□ -0.31
UBP12P39538 PEX25YPL112C 1185 nt13.13□□□□□ -0.31
UBP12P39538 SWC5YBR231C 912 nt13.13□□□□□ -0.31
UBP12P39538 FEN2YCR028C 1539 nt13.13□□□□□ -0.31
UBP12P39538 HEM12YDR047W 1089 nt13.12□□□□□ -0.31
UBP12P39538 ANP1YEL036C 1503 nt13.12□□□□□ -0.31
UBP12P39538 YNL115CYNL115C 1935 nt13.11□□□□□ -0.31
UBP12P39538 ALG3YBL082C 1377 nt13.11□□□□□ -0.31
UBP12P39538 PTK1YKL198C 1989 nt13.05□□□□□ -0.32
UBP12P39538 YIR016WYIR016W 798 nt13.01□□□□□ -0.33
UBP12P39538 SPT8YLR055C 1809 nt12.94□□□□□ -0.34
UBP12P39538 YHR056W-AYHR056W-A 435 nt12.9□□□□□ -0.34
UBP12P39538 SBA1YKL117W 651 nt12.89□□□□□ -0.35
UBP12P39538 NAT4YMR069W 858 nt12.88□□□□□ -0.35
UBP12P39538 VPS75YNL246W 795 nt12.88□□□□□ -0.35
UBP12P39538 YFL054CYFL054C 1941 nt12.86□□□□□ -0.35
UBP12P39538 GLK1YCL040W 1503 nt12.86□□□□□ -0.35
UBP12P39538 BNA2YJR078W 1362 nt12.85□□□□□ -0.35
UBP12P39538 MIR1YJR077C 936 nt12.83□□□□□ -0.36
UBP12P39538 RAX1YOR301W 1308 nt12.82□□□□□ -0.36
UBP12P39538 TIM17YJL143W 477 nt12.81□□□□□ -0.36
UBP12P39538 SHM2YLR058C 1410 nt12.8□□□□□ -0.36
UBP12P39538 MIC12YBR262C 321 nt12.8□□□□□ -0.36
UBP12P39538 XDJ1YLR090W 1380 nt12.8□□□□□ -0.36
UBP12P39538 THI74YDR438W 1113 nt12.79□□□□□ -0.36
UBP12P39538 MSF1YPR047W 1410 nt12.78□□□□□ -0.36
UBP12P39538 PAU7YAR020C 168 nt12.75□□□□□ -0.37
UBP12P39538 HHO1YPL127C 777 nt12.73□□□□□ -0.37
UBP12P39538 GDH3YAL062W 1374 nt12.72□□□□□ -0.37
UBP12P39538 NIT1YIL164C 600 nt12.68□□□□□ -0.38
UBP12P39538 DAT1YML113W 747 nt12.68□□□□□ -0.38
UBP12P39538 SGT2YOR007C 1041 nt12.67□□□□□ -0.38
UBP12P39538 YGR201CYGR201C 678 nt12.64□□□□□ -0.39
UBP12P39538 SHB17YKR043C 816 nt12.64□□□□□ -0.39
UBP12P39538 NVJ2YPR091C 2313 nt12.63□□□□□ -0.39
UBP12P39538 UBA4YHR111W 1323 nt12.62□□□□□ -0.39
UBP12P39538 AVT6YER119C 1347 nt12.6□□□□□ -0.39
UBP12P39538 CCA1YER168C 1641 nt12.59□□□□□ -0.39
UBP12P39538 YDR010CYDR010C 333 nt12.58□□□□□ -0.4
UBP12P39538 AGP1YCL025C 1902 nt12.58□□□□□ -0.4
UBP12P39538 PAC11YDR488C 1602 nt12.58□□□□□ -0.4
UBP12P39538 DUT1YBR252W 444 nt12.57□□□□□ -0.4
UBP12P39538 SWE1YJL187C 2460 nt12.57□□□□□ -0.4
UBP12P39538 YGL034CYGL034C 366 nt12.56□□□□□ -0.4
UBP12P39538 YSR3YKR053C 1215 nt12.54□□□□□ -0.4
UBP12P39538 GOR1YNL274C 1053 nt12.53□□□□□ -0.4
UBP12P39538 XYL2YLR070C 1071 nt12.51□□□□□ -0.41
UBP12P39538 PHO89YBR296C 1725 nt12.47□□□□□ -0.41
UBP12P39538 RET2YFR051C 1641 nt12.45□□□□□ -0.42
UBP12P39538 RBG1YAL036C 1110 nt12.42□□□□□ -0.42
UBP12P39538 YMR244WYMR244W 1068 nt12.41□□□□□ -0.42
UBP12P39538 YCR102CYCR102C 1107 nt12.4□□□□□ -0.42
UBP12P39538 NDI1YML120C 1542 nt12.4□□□□□ -0.42
UBP12P39538 DUS1YML080W 1272 nt12.37□□□□□ -0.43
UBP12P39538 GLR1YPL091W 1452 nt12.37□□□□□ -0.43
UBP12P39538 SFA1YDL168W 1161 nt12.34□□□□□ -0.43
UBP12P39538 YCR087WYCR087W 516 nt12.33□□□□□ -0.44
UBP12P39538 COQ2YNR041C 1119 nt12.32□□□□□ -0.44
UBP12P39538 AIM45YPR004C 1035 nt12.32□□□□□ -0.44
UBP12P39538 MRP20YDR405W 792 nt12.3□□□□□ -0.44
UBP12P39538 NBP35YGL091C 987 nt12.29□□□□□ -0.44
UBP12P39538 YHL019W-AYHL019W-A 594 nt12.28□□□□□ -0.44
UBP12P39538 STR3YGL184C 1398 nt12.28□□□□□ -0.44
UBP12P39538 AQY2YLL052C 450 nt12.27□□□□□ -0.45
UBP12P39538 SHH4YLR164W 507 nt12.27□□□□□ -0.45
UBP12P39538 RDN18-1RDN18-1 1800 nt12.25□□□□□ -0.45
UBP12P39538 RDN18-2RDN18-2 1800 nt12.25□□□□□ -0.45
UBP12P39538 YCL074WYCL074W 927 nt12.21□□□□□ -0.45
UBP12P39538 TIR3YIL011W 810 nt12.19□□□□□ -0.46
UBP12P39538 RBG2YGR173W 1107 nt12.16□□□□□ -0.46
UBP12P39538 TOM6YOR045W 186 nt12.16□□□□□ -0.46
UBP12P39538 FUR4YBR021W 1902 nt12.15□□□□□ -0.46
UBP12P39538 POM34YLR018C 900 nt12.12□□□□□ -0.47
UBP12P39538 RPL4BYDR012W 1089 nt12.11□□□□□ -0.47
UBP12P39538 RPL4AYBR031W 1089 nt12.11□□□□□ -0.47
UBP12P39538 PRO1YDR300C 1287 nt12.1□□□□□ -0.47
UBP12P39538 PEX2YJL210W 816 nt12.1□□□□□ -0.47
UBP12P39538 CLB6YGR109C 1143 nt12.06□□□□□ -0.48
UBP12P39538 RPS14BYJL191W 417 nt12.06□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms