Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 FTR1YER145C 1215 nt11.26□□□□□ -0.61
VPS41P38959 PUS2YGL063W 1113 nt11.26□□□□□ -0.61
VPS41P38959 IRC24YIR036C 792 nt11.26□□□□□ -0.61
VPS41P38959 YCL042WYCL042W 360 nt11.25□□□□□ -0.61
VPS41P38959 TRM5YHR070W 1500 nt11.24□□□□□ -0.61
VPS41P38959 YCL074WYCL074W 927 nt11.23□□□□□ -0.61
VPS41P38959 tM(CAU)CtM(CAU)C 72 nt11.22□□□□□ -0.61
VPS41P38959 IMT4tM(CAU)E 72 nt11.22□□□□□ -0.61
VPS41P38959 IMT3tM(CAU)J3 72 nt11.22□□□□□ -0.61
VPS41P38959 IMT1tM(CAU)O1 72 nt11.22□□□□□ -0.61
VPS41P38959 IMT2tM(CAU)P 72 nt11.22□□□□□ -0.61
VPS41P38959 GAL1YBR020W 1587 nt11.22□□□□□ -0.61
VPS41P38959 HSL7YBR133C 2484 nt11.2□□□□□ -0.62
VPS41P38959 YDR433WYDR433W 441 nt11.2□□□□□ -0.62
VPS41P38959 IMP2'YIL154C 1041 nt11.2□□□□□ -0.62
VPS41P38959 DUS1YML080W 1272 nt11.2□□□□□ -0.62
VPS41P38959 DDR2YOL052C-A 186 nt11.19□□□□□ -0.62
VPS41P38959 RDN37-1RDN37-1 5354 nt11.18□□□□□ -0.62
VPS41P38959 RDN37-2RDN37-2 5354 nt11.18□□□□□ -0.62
VPS41P38959 YDL086C-AYDL086C-A 435 nt11.18□□□□□ -0.62
VPS41P38959 MIC12YBR262C 321 nt11.17□□□□□ -0.62
VPS41P38959 BNA2YJR078W 1362 nt11.16□□□□□ -0.62
VPS41P38959 ANP1YEL036C 1503 nt11.16□□□□□ -0.62
VPS41P38959 RPM1RPM1 483 nt11.16□□□□□ -0.62
VPS41P38959 YAT1YAR035W 2064 nt11.16□□□□□ -0.62
VPS41P38959 FMP45YDL222C 930 nt11.15□□□□□ -0.62
VPS41P38959 FRD1YEL047C 1413 nt11.14□□□□□ -0.63
VPS41P38959 YPR011CYPR011C 981 nt11.12□□□□□ -0.63
VPS41P38959 DIC1YLR348C 897 nt11.08□□□□□ -0.64
VPS41P38959 RDN18-1RDN18-1 1800 nt11.07□□□□□ -0.64
VPS41P38959 RDN18-2RDN18-2 1800 nt11.07□□□□□ -0.64
VPS41P38959 HHO1YPL127C 777 nt11.05□□□□□ -0.64
VPS41P38959 NDI1YML120C 1542 nt11.03□□□□□ -0.64
VPS41P38959 XDJ1YLR090W 1380 nt11.03□□□□□ -0.64
VPS41P38959 STR3YGL184C 1398 nt11.01□□□□□ -0.65
VPS41P38959 FEN2YCR028C 1539 nt10.99□□□□□ -0.65
VPS41P38959 YDR524C-BYDR524C-B 201 nt10.99□□□□□ -0.65
VPS41P38959 ERV46YAL042W 1248 nt10.99□□□□□ -0.65
VPS41P38959 YKR040CYKR040C 504 nt10.99□□□□□ -0.65
VPS41P38959 LPX1YOR084W 1164 nt10.99□□□□□ -0.65
VPS41P38959 STB1YNL309W 1263 nt10.98□□□□□ -0.65
VPS41P38959 AQY1YPR192W 918 nt10.96□□□□□ -0.65
VPS41P38959 DUT1YBR252W 444 nt10.96□□□□□ -0.65
VPS41P38959 RDN25-1RDN25-1 3396 nt10.95□□□□□ -0.66
VPS41P38959 RDN25-2RDN25-2 3396 nt10.95□□□□□ -0.66
VPS41P38959 SPC25YER018C 666 nt10.95□□□□□ -0.66
VPS41P38959 YIR016WYIR016W 798 nt10.92□□□□□ -0.66
VPS41P38959 SPT20YOL148C 1815 nt10.9□□□□□ -0.66
VPS41P38959 YGR201CYGR201C 678 nt10.89□□□□□ -0.67
VPS41P38959 GPI16YHR188C 1833 nt10.88□□□□□ -0.67
VPS41P38959 AQY2YLL052C 450 nt10.86□□□□□ -0.67
VPS41P38959 VPS60YDR486C 690 nt10.85□□□□□ -0.67
VPS41P38959 GDH3YAL062W 1374 nt10.84□□□□□ -0.67
VPS41P38959 RPC82YPR190C 1965 nt10.84□□□□□ -0.67
VPS41P38959 RTN2YDL204W 1182 nt10.83□□□□□ -0.68
VPS41P38959 HEL2YDR266C 1920 nt10.83□□□□□ -0.68
VPS41P38959 ALG3YBL082C 1377 nt10.82□□□□□ -0.68
VPS41P38959 CCT4YDL143W 1587 nt10.79□□□□□ -0.68
VPS41P38959 INA1YLR413W 2028 nt10.77□□□□□ -0.68
VPS41P38959 TIM23YNR017W 669 nt10.75□□□□□ -0.69
VPS41P38959 YLR179CYLR179C 606 nt10.74□□□□□ -0.69
VPS41P38959 AVT6YER119C 1347 nt10.74□□□□□ -0.69
VPS41P38959 PTH1YHR189W 573 nt10.72□□□□□ -0.69
VPS41P38959 HIF1YLL022C 1158 nt10.72□□□□□ -0.69
VPS41P38959 GOR1YNL274C 1053 nt10.72□□□□□ -0.69
VPS41P38959 RIM8YGL045W 1629 nt10.71□□□□□ -0.69
VPS41P38959 SWC5YBR231C 912 nt10.7□□□□□ -0.7
VPS41P38959 FRE6YLL051C 2139 nt10.69□□□□□ -0.7
VPS41P38959 AHT1YHR093W 549 nt10.68□□□□□ -0.7
VPS41P38959 SPP1YPL138C 1062 nt10.68□□□□□ -0.7
VPS41P38959 PRM5YIL117C 957 nt10.64□□□□□ -0.71
VPS41P38959 ALD4YOR374W 1560 nt10.64□□□□□ -0.71
VPS41P38959 MUP1YGR055W 1725 nt10.64□□□□□ -0.71
VPS41P38959 PLB1YMR008C 1995 nt10.63□□□□□ -0.71
VPS41P38959 YLR235CYLR235C 399 nt10.63□□□□□ -0.71
VPS41P38959 YGL114WYGL114W 2178 nt10.62□□□□□ -0.71
VPS41P38959 ARP6YLR085C 1317 nt10.54□□□□□ -0.72
VPS41P38959 HOL1YNR055C 1761 nt10.53□□□□□ -0.72
VPS41P38959 NBP35YGL091C 987 nt10.49□□□□□ -0.73
VPS41P38959 SHM2YLR058C 1410 nt10.49□□□□□ -0.73
VPS41P38959 YPR064WYPR064W 420 nt10.48□□□□□ -0.73
VPS41P38959 MAE1YKL029C 2010 nt10.48□□□□□ -0.73
VPS41P38959 YKL030WYKL030W 606 nt10.46□□□□□ -0.73
VPS41P38959 ZRT3YKL175W 1512 nt10.46□□□□□ -0.74
VPS41P38959 DAT1YML113W 747 nt10.45□□□□□ -0.74
VPS41P38959 UTR1YJR049C 1593 nt10.44□□□□□ -0.74
VPS41P38959 TAD3YLR316C 969 nt10.42□□□□□ -0.74
VPS41P38959 YJL067WYJL067W 351 nt10.41□□□□□ -0.74
VPS41P38959 SSN3YPL042C 1668 nt10.39□□□□□ -0.75
VPS41P38959 NIT1YIL164C 600 nt10.39□□□□□ -0.75
VPS41P38959 BDH1YAL060W 1149 nt10.39□□□□□ -0.75
VPS41P38959 RTG1YOL067C 534 nt10.36□□□□□ -0.75
VPS41P38959 YCR102CYCR102C 1107 nt10.35□□□□□ -0.75
VPS41P38959 YNL024CYNL024C 741 nt10.34□□□□□ -0.75
VPS41P38959 TIM17YJL143W 477 nt10.32□□□□□ -0.76
VPS41P38959 YOR325WYOR325W 474 nt10.32□□□□□ -0.76
VPS41P38959 ILV3YJR016C 1758 nt10.31□□□□□ -0.76
VPS41P38959 ACO2YJL200C 2370 nt10.31□□□□□ -0.76
VPS41P38959 YLR415CYLR415C 339 nt10.31□□□□□ -0.76
VPS41P38959 YMR209CYMR209C 1374 nt10.29□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 39.3 ms