Protein–RNA interactions for Protein: P38337

SHG1, COMPASS component SHG1, yeastyeast

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHG1P38337 RDN25-1RDN25-1 3396 nt9.06□□□□□ -0.96
SHG1P38337 RDN25-2RDN25-2 3396 nt9.06□□□□□ -0.96
SHG1P38337 CMP2YML057W 1815 nt9.05□□□□□ -0.96
SHG1P38337 YCL074WYCL074W 927 nt9.05□□□□□ -0.96
SHG1P38337 SNF1YDR477W 1902 nt9.05□□□□□ -0.96
SHG1P38337 ATF2YGR177C 1608 nt9.05□□□□□ -0.96
SHG1P38337 IMP2'YIL154C 1041 nt9.04□□□□□ -0.96
SHG1P38337 PBP1YGR178C 2169 nt9.04□□□□□ -0.96
SHG1P38337 YLR281CYLR281C 468 nt9.03□□□□□ -0.96
SHG1P38337 DDR2YOL052C-A 186 nt9.03□□□□□ -0.96
SHG1P38337 HEL2YDR266C 1920 nt9□□□□□ -0.97
SHG1P38337 YDR433WYDR433W 441 nt8.99□□□□□ -0.97
SHG1P38337 FTR1YER145C 1215 nt8.99□□□□□ -0.97
SHG1P38337 YDL086C-AYDL086C-A 435 nt8.96□□□□□ -0.98
SHG1P38337 TRM5YHR070W 1500 nt8.95□□□□□ -0.98
SHG1P38337 GAL1YBR020W 1587 nt8.94□□□□□ -0.98
SHG1P38337 MIC12YBR262C 321 nt8.91□□□□□ -0.98
SHG1P38337 ANP1YEL036C 1503 nt8.9□□□□□ -0.99
SHG1P38337 NDI1YML120C 1542 nt8.9□□□□□ -0.99
SHG1P38337 HHO1YPL127C 777 nt8.89□□□□□ -0.99
SHG1P38337 AQY1YPR192W 918 nt8.89□□□□□ -0.99
SHG1P38337 MXR2YCL033C 507 nt8.89□□□□□ -0.99
SHG1P38337 DIC1YLR348C 897 nt8.87□□□□□ -0.99
SHG1P38337 AGP1YCL025C 1902 nt8.87□□□□□ -0.99
SHG1P38337 YAT1YAR035W 2064 nt8.86□□□□□ -0.99
SHG1P38337 MET2YNL277W 1461 nt8.86□□□□□ -0.99
SHG1P38337 FMP45YDL222C 930 nt8.83□□□□□ -1
SHG1P38337 SFP1YLR403W 2052 nt8.82□□□□□ -1
SHG1P38337 FRD1YEL047C 1413 nt8.81□□□□□ -1
SHG1P38337 YGR201CYGR201C 678 nt8.81□□□□□ -1
SHG1P38337 YDR524C-BYDR524C-B 201 nt8.8□□□□□ -1
SHG1P38337 GPI16YHR188C 1833 nt8.79□□□□□ -1
SHG1P38337 FEN2YCR028C 1539 nt8.79□□□□□ -1
SHG1P38337 YKR040CYKR040C 504 nt8.78□□□□□ -1
SHG1P38337 STB1YNL309W 1263 nt8.78□□□□□ -1
SHG1P38337 FRE6YLL051C 2139 nt8.78□□□□□ -1
SHG1P38337 RTN2YDL204W 1182 nt8.76□□□□□ -1.01
SHG1P38337 SPC25YER018C 666 nt8.75□□□□□ -1.01
SHG1P38337 PUS2YGL063W 1113 nt8.75□□□□□ -1.01
SHG1P38337 ERV46YAL042W 1248 nt8.75□□□□□ -1.01
SHG1P38337 NPP1YCR026C 2229 nt8.74□□□□□ -1.01
SHG1P38337 YOR139CYOR139C 393 nt8.74□□□□□ -1.01
SHG1P38337 SPT20YOL148C 1815 nt8.74□□□□□ -1.01
SHG1P38337 STR3YGL184C 1398 nt8.73□□□□□ -1.01
SHG1P38337 RDN18-1RDN18-1 1800 nt8.73□□□□□ -1.01
SHG1P38337 RDN18-2RDN18-2 1800 nt8.73□□□□□ -1.01
SHG1P38337 GID7YCL039W 2238 nt8.72□□□□□ -1.01
SHG1P38337 AQY2YLL052C 450 nt8.72□□□□□ -1.01
SHG1P38337 INA1YLR413W 2028 nt8.71□□□□□ -1.01
SHG1P38337 YIR016WYIR016W 798 nt8.71□□□□□ -1.02
SHG1P38337 XDJ1YLR090W 1380 nt8.71□□□□□ -1.02
SHG1P38337 GOR1YNL274C 1053 nt8.69□□□□□ -1.02
SHG1P38337 GDH3YAL062W 1374 nt8.67□□□□□ -1.02
SHG1P38337 SSN3YPL042C 1668 nt8.67□□□□□ -1.02
SHG1P38337 LPX1YOR084W 1164 nt8.66□□□□□ -1.02
SHG1P38337 VPS60YDR486C 690 nt8.65□□□□□ -1.02
SHG1P38337 SWC5YBR231C 912 nt8.65□□□□□ -1.02
SHG1P38337 MAE1YKL029C 2010 nt8.63□□□□□ -1.03
SHG1P38337 YLR179CYLR179C 606 nt8.63□□□□□ -1.03
SHG1P38337 CCT4YDL143W 1587 nt8.63□□□□□ -1.03
SHG1P38337 AVT6YER119C 1347 nt8.62□□□□□ -1.03
SHG1P38337 TIM23YNR017W 669 nt8.62□□□□□ -1.03
SHG1P38337 HMG2YLR450W 3138 nt8.6□□□□□ -1.03
SHG1P38337 YLR235CYLR235C 399 nt8.59□□□□□ -1.03
SHG1P38337 YPR011CYPR011C 981 nt8.58□□□□□ -1.04
SHG1P38337 DUT1YBR252W 444 nt8.57□□□□□ -1.04
SHG1P38337 TPO4YOR273C 1980 nt8.57□□□□□ -1.04
SHG1P38337 RPC82YPR190C 1965 nt8.57□□□□□ -1.04
SHG1P38337 ALD4YOR374W 1560 nt8.56□□□□□ -1.04
SHG1P38337 RIM8YGL045W 1629 nt8.55□□□□□ -1.04
SHG1P38337 ALG3YBL082C 1377 nt8.54□□□□□ -1.04
SHG1P38337 HIF1YLL022C 1158 nt8.53□□□□□ -1.04
SHG1P38337 UGA4YDL210W 1716 nt8.52□□□□□ -1.05
SHG1P38337 YGL114WYGL114W 2178 nt8.51□□□□□ -1.05
SHG1P38337 AHT1YHR093W 549 nt8.5□□□□□ -1.05
SHG1P38337 PTH1YHR189W 573 nt8.5□□□□□ -1.05
SHG1P38337 tM(CAU)CtM(CAU)C 72 nt8.48□□□□□ -1.05
SHG1P38337 IMT4tM(CAU)E 72 nt8.48□□□□□ -1.05
SHG1P38337 IMT3tM(CAU)J3 72 nt8.48□□□□□ -1.05
SHG1P38337 IMT1tM(CAU)O1 72 nt8.48□□□□□ -1.05
SHG1P38337 IMT2tM(CAU)P 72 nt8.48□□□□□ -1.05
SHG1P38337 YPR064WYPR064W 420 nt8.47□□□□□ -1.05
SHG1P38337 PLB1YMR008C 1995 nt8.47□□□□□ -1.05
SHG1P38337 ZRT3YKL175W 1512 nt8.46□□□□□ -1.05
SHG1P38337 SAM35YHR083W 990 nt8.46□□□□□ -1.06
SHG1P38337 BSP1YPR171W 1731 nt8.46□□□□□ -1.06
SHG1P38337 PRM5YIL117C 957 nt8.45□□□□□ -1.06
SHG1P38337 URA8YJR103W 1737 nt8.43□□□□□ -1.06
SHG1P38337 ARP6YLR085C 1317 nt8.42□□□□□ -1.06
SHG1P38337 ESBP6YNL125C 2022 nt8.42□□□□□ -1.06
SHG1P38337 ACO2YJL200C 2370 nt8.42□□□□□ -1.06
SHG1P38337 MUP1YGR055W 1725 nt8.4□□□□□ -1.07
SHG1P38337 ILV2YMR108W 2064 nt8.39□□□□□ -1.07
SHG1P38337 DAT1YML113W 747 nt8.38□□□□□ -1.07
SHG1P38337 TIM17YJL143W 477 nt8.37□□□□□ -1.07
SHG1P38337 YCR102CYCR102C 1107 nt8.36□□□□□ -1.07
SHG1P38337 YKL030WYKL030W 606 nt8.36□□□□□ -1.07
SHG1P38337 SHM2YLR058C 1410 nt8.36□□□□□ -1.07
SHG1P38337 TAD3YLR316C 969 nt8.35□□□□□ -1.07
SHG1P38337 GTB1YDR221W 2109 nt8.34□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms