Protein–RNA interactions for Protein: P25594

VBA3, Vacuolar basic amino acid transporter 3, yeastyeast

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA3P25594 CRR1YLR213C 1269 nt11.53□□□□□ -0.56
VBA3P25594 YFL067WYFL067W 528 nt11.51□□□□□ -0.57
VBA3P25594 LYS4YDR234W 2082 nt11.5□□□□□ -0.57
VBA3P25594 STB1YNL309W 1263 nt11.5□□□□□ -0.57
VBA3P25594 DDR2YOL052C-A 186 nt11.5□□□□□ -0.57
VBA3P25594 SPC25YER018C 666 nt11.48□□□□□ -0.57
VBA3P25594 YDR524C-BYDR524C-B 201 nt11.46□□□□□ -0.57
VBA3P25594 YFR018CYFR018C 1092 nt11.44□□□□□ -0.58
VBA3P25594 CCT4YDL143W 1587 nt11.44□□□□□ -0.58
VBA3P25594 YDL086C-AYDL086C-A 435 nt11.43□□□□□ -0.58
VBA3P25594 GPI16YHR188C 1833 nt11.42□□□□□ -0.58
VBA3P25594 PTK1YKL198C 1989 nt11.42□□□□□ -0.58
VBA3P25594 SNG1YGR197C 1644 nt11.42□□□□□ -0.58
VBA3P25594 BDH1YAL060W 1149 nt11.41□□□□□ -0.58
VBA3P25594 MIC10YCL057C-A 294 nt11.41□□□□□ -0.58
VBA3P25594 HEM12YDR047W 1089 nt11.4□□□□□ -0.58
VBA3P25594 VPS60YDR486C 690 nt11.4□□□□□ -0.58
VBA3P25594 PRE6YOL038W 765 nt11.4□□□□□ -0.58
VBA3P25594 ANP1YEL036C 1503 nt11.4□□□□□ -0.59
VBA3P25594 FEN2YCR028C 1539 nt11.37□□□□□ -0.59
VBA3P25594 SWC5YBR231C 912 nt11.36□□□□□ -0.59
VBA3P25594 YSP3YOR003W 1437 nt11.35□□□□□ -0.59
VBA3P25594 YFL015W-AYFL015W-A 318 nt11.35□□□□□ -0.59
VBA3P25594 PAU16YKL224C 372 nt11.35□□□□□ -0.59
VBA3P25594 YLR415CYLR415C 339 nt11.35□□□□□ -0.59
VBA3P25594 ALG3YBL082C 1377 nt11.35□□□□□ -0.59
VBA3P25594 YFL066CYFL066C 1179 nt11.34□□□□□ -0.59
VBA3P25594 PEX25YPL112C 1185 nt11.34□□□□□ -0.59
VBA3P25594 RRT5YFR032C 870 nt11.33□□□□□ -0.6
VBA3P25594 YNL115CYNL115C 1935 nt11.29□□□□□ -0.6
VBA3P25594 YHR056W-AYHR056W-A 435 nt11.26□□□□□ -0.61
VBA3P25594 YIR016WYIR016W 798 nt11.26□□□□□ -0.61
VBA3P25594 YFL054CYFL054C 1941 nt11.23□□□□□ -0.61
VBA3P25594 SPT8YLR055C 1809 nt11.19□□□□□ -0.62
VBA3P25594 RAX1YOR301W 1308 nt11.17□□□□□ -0.62
VBA3P25594 BNA2YJR078W 1362 nt11.16□□□□□ -0.62
VBA3P25594 MIC12YBR262C 321 nt11.15□□□□□ -0.62
VBA3P25594 VPS75YNL246W 795 nt11.14□□□□□ -0.63
VBA3P25594 TIM17YJL143W 477 nt11.1□□□□□ -0.63
VBA3P25594 XDJ1YLR090W 1380 nt11.09□□□□□ -0.63
VBA3P25594 SHM2YLR058C 1410 nt11.08□□□□□ -0.64
VBA3P25594 NAT4YMR069W 858 nt11.05□□□□□ -0.64
VBA3P25594 MIR1YJR077C 936 nt11.04□□□□□ -0.64
VBA3P25594 HHO1YPL127C 777 nt11.04□□□□□ -0.64
VBA3P25594 GLK1YCL040W 1503 nt11.04□□□□□ -0.64
VBA3P25594 GDH3YAL062W 1374 nt11.02□□□□□ -0.65
VBA3P25594 YGR201CYGR201C 678 nt11.01□□□□□ -0.65
VBA3P25594 SWE1YJL187C 2460 nt11□□□□□ -0.65
VBA3P25594 CCA1YER168C 1641 nt10.98□□□□□ -0.65
VBA3P25594 THI74YDR438W 1113 nt10.98□□□□□ -0.65
VBA3P25594 NIT1YIL164C 600 nt10.98□□□□□ -0.65
VBA3P25594 PAU7YAR020C 168 nt10.98□□□□□ -0.65
VBA3P25594 MSF1YPR047W 1410 nt10.97□□□□□ -0.65
VBA3P25594 SGT2YOR007C 1041 nt10.96□□□□□ -0.65
VBA3P25594 AGP1YCL025C 1902 nt10.94□□□□□ -0.66
VBA3P25594 SBA1YKL117W 651 nt10.94□□□□□ -0.66
VBA3P25594 AVT6YER119C 1347 nt10.92□□□□□ -0.66
VBA3P25594 SHB17YKR043C 816 nt10.89□□□□□ -0.67
VBA3P25594 DAT1YML113W 747 nt10.89□□□□□ -0.67
VBA3P25594 DUT1YBR252W 444 nt10.88□□□□□ -0.67
VBA3P25594 UBA4YHR111W 1323 nt10.86□□□□□ -0.67
VBA3P25594 YDR010CYDR010C 333 nt10.86□□□□□ -0.67
VBA3P25594 GOR1YNL274C 1053 nt10.86□□□□□ -0.67
VBA3P25594 NME1NME1 340 nt10.84□□□□□ -0.67
VBA3P25594 PAC11YDR488C 1602 nt10.83□□□□□ -0.68
VBA3P25594 NVJ2YPR091C 2313 nt10.83□□□□□ -0.68
VBA3P25594 YSR3YKR053C 1215 nt10.8□□□□□ -0.68
VBA3P25594 YGL034CYGL034C 366 nt10.79□□□□□ -0.68
VBA3P25594 RET2YFR051C 1641 nt10.76□□□□□ -0.69
VBA3P25594 YCR102CYCR102C 1107 nt10.75□□□□□ -0.69
VBA3P25594 DUS1YML080W 1272 nt10.75□□□□□ -0.69
VBA3P25594 XYL2YLR070C 1071 nt10.74□□□□□ -0.69
VBA3P25594 PHO89YBR296C 1725 nt10.74□□□□□ -0.69
VBA3P25594 YJL225CYJL225C 5277 nt10.71□□□□□ -0.7
VBA3P25594 STR3YGL184C 1398 nt10.68□□□□□ -0.7
VBA3P25594 YCR087WYCR087W 516 nt10.67□□□□□ -0.7
VBA3P25594 RDN18-1RDN18-1 1800 nt10.66□□□□□ -0.7
VBA3P25594 RDN18-2RDN18-2 1800 nt10.66□□□□□ -0.7
VBA3P25594 YCL074WYCL074W 927 nt10.66□□□□□ -0.7
VBA3P25594 NBP35YGL091C 987 nt10.66□□□□□ -0.7
VBA3P25594 SFA1YDL168W 1161 nt10.65□□□□□ -0.7
VBA3P25594 RBG1YAL036C 1110 nt10.65□□□□□ -0.7
VBA3P25594 AQY2YLL052C 450 nt10.65□□□□□ -0.7
VBA3P25594 FUR4YBR021W 1902 nt10.63□□□□□ -0.71
VBA3P25594 AIM45YPR004C 1035 nt10.63□□□□□ -0.71
VBA3P25594 NDI1YML120C 1542 nt10.63□□□□□ -0.71
VBA3P25594 COQ2YNR041C 1119 nt10.62□□□□□ -0.71
VBA3P25594 YHL019W-AYHL019W-A 594 nt10.61□□□□□ -0.71
VBA3P25594 SHH4YLR164W 507 nt10.61□□□□□ -0.71
VBA3P25594 MRP20YDR405W 792 nt10.6□□□□□ -0.71
VBA3P25594 YMR244WYMR244W 1068 nt10.6□□□□□ -0.71
VBA3P25594 GLR1YPL091W 1452 nt10.59□□□□□ -0.71
VBA3P25594 TIR3YIL011W 810 nt10.58□□□□□ -0.72
VBA3P25594 POM34YLR018C 900 nt10.51□□□□□ -0.73
VBA3P25594 TOM6YOR045W 186 nt10.5□□□□□ -0.73
VBA3P25594 LSC2YGR244C 1284 nt10.48□□□□□ -0.73
VBA3P25594 RPL4BYDR012W 1089 nt10.47□□□□□ -0.73
VBA3P25594 PRO1YDR300C 1287 nt10.47□□□□□ -0.73
VBA3P25594 RPL4AYBR031W 1089 nt10.47□□□□□ -0.73
VBA3P25594 ARP6YLR085C 1317 nt10.45□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms