Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 TRM5YHR070W 1500 nt11.55□□□□□ -0.56
VPS3P23643 ERF2YLR246W 1080 nt11.53□□□□□ -0.56
VPS3P23643 PRE6YOL038W 765 nt11.53□□□□□ -0.56
VPS3P23643 STB1YNL309W 1263 nt11.52□□□□□ -0.57
VPS3P23643 SPC25YER018C 666 nt11.51□□□□□ -0.57
VPS3P23643 YFL067WYFL067W 528 nt11.51□□□□□ -0.57
VPS3P23643 DDR2YOL052C-A 186 nt11.51□□□□□ -0.57
VPS3P23643 PEX25YPL112C 1185 nt11.49□□□□□ -0.57
VPS3P23643 ATF2YGR177C 1608 nt11.48□□□□□ -0.57
VPS3P23643 GPI16YHR188C 1833 nt11.47□□□□□ -0.57
VPS3P23643 CCT4YDL143W 1587 nt11.47□□□□□ -0.57
VPS3P23643 YDR524C-BYDR524C-B 201 nt11.47□□□□□ -0.57
VPS3P23643 BDH1YAL060W 1149 nt11.47□□□□□ -0.57
VPS3P23643 YLR415CYLR415C 339 nt11.47□□□□□ -0.57
VPS3P23643 YSP3YOR003W 1437 nt11.44□□□□□ -0.58
VPS3P23643 YFL066CYFL066C 1179 nt11.44□□□□□ -0.58
VPS3P23643 CRR1YLR213C 1269 nt11.44□□□□□ -0.58
VPS3P23643 RDN37-1RDN37-1 5354 nt11.43□□□□□ -0.58
VPS3P23643 RDN37-2RDN37-2 5354 nt11.43□□□□□ -0.58
VPS3P23643 PIB2YGL023C 1908 nt11.43□□□□□ -0.58
VPS3P23643 NCP1YHR042W 2076 nt11.42□□□□□ -0.58
VPS3P23643 YDL086C-AYDL086C-A 435 nt11.42□□□□□ -0.58
VPS3P23643 SWC5YBR231C 912 nt11.41□□□□□ -0.58
VPS3P23643 YNL115CYNL115C 1935 nt11.4□□□□□ -0.58
VPS3P23643 VPS60YDR486C 690 nt11.39□□□□□ -0.59
VPS3P23643 RTF1YGL244W 1677 nt11.39□□□□□ -0.59
VPS3P23643 BOP3YNL042W 1191 nt11.37□□□□□ -0.59
VPS3P23643 FEN2YCR028C 1539 nt11.36□□□□□ -0.59
VPS3P23643 ANP1YEL036C 1503 nt11.36□□□□□ -0.59
VPS3P23643 HEM12YDR047W 1089 nt11.34□□□□□ -0.59
VPS3P23643 LYS4YDR234W 2082 nt11.32□□□□□ -0.6
VPS3P23643 SNG1YGR197C 1644 nt11.32□□□□□ -0.6
VPS3P23643 ALG3YBL082C 1377 nt11.32□□□□□ -0.6
VPS3P23643 NAT4YMR069W 858 nt11.32□□□□□ -0.6
VPS3P23643 VPS75YNL246W 795 nt11.3□□□□□ -0.6
VPS3P23643 GLK1YCL040W 1503 nt11.3□□□□□ -0.6
VPS3P23643 SBA1YKL117W 651 nt11.28□□□□□ -0.6
VPS3P23643 MIC10YCL057C-A 294 nt11.27□□□□□ -0.61
VPS3P23643 SPT8YLR055C 1809 nt11.26□□□□□ -0.61
VPS3P23643 YIR016WYIR016W 798 nt11.25□□□□□ -0.61
VPS3P23643 MSF1YPR047W 1410 nt11.2□□□□□ -0.62
VPS3P23643 MIR1YJR077C 936 nt11.2□□□□□ -0.62
VPS3P23643 THI74YDR438W 1113 nt11.19□□□□□ -0.62
VPS3P23643 PTK1YKL198C 1989 nt11.18□□□□□ -0.62
VPS3P23643 TIM17YJL143W 477 nt11.18□□□□□ -0.62
VPS3P23643 BNA2YJR078W 1362 nt11.15□□□□□ -0.63
VPS3P23643 YHR056W-AYHR056W-A 435 nt11.14□□□□□ -0.63
VPS3P23643 PAU7YAR020C 168 nt11.14□□□□□ -0.63
VPS3P23643 UME6YDR207C 2511 nt11.11□□□□□ -0.63
VPS3P23643 SHM2YLR058C 1410 nt11.09□□□□□ -0.63
VPS3P23643 MIC12YBR262C 321 nt11.08□□□□□ -0.64
VPS3P23643 RAX1YOR301W 1308 nt11.08□□□□□ -0.64
VPS3P23643 XDJ1YLR090W 1380 nt11.07□□□□□ -0.64
VPS3P23643 DAT1YML113W 747 nt11.06□□□□□ -0.64
VPS3P23643 BOR1YNL275W 1731 nt11.04□□□□□ -0.64
VPS3P23643 UBA4YHR111W 1323 nt11.02□□□□□ -0.65
VPS3P23643 YGR201CYGR201C 678 nt11.01□□□□□ -0.65
VPS3P23643 GDH3YAL062W 1374 nt11.01□□□□□ -0.65
VPS3P23643 SHB17YKR043C 816 nt10.99□□□□□ -0.65
VPS3P23643 HHO1YPL127C 777 nt10.99□□□□□ -0.65
VPS3P23643 YFL054CYFL054C 1941 nt10.99□□□□□ -0.65
VPS3P23643 YGL034CYGL034C 366 nt10.98□□□□□ -0.65
VPS3P23643 NIT1YIL164C 600 nt10.97□□□□□ -0.65
VPS3P23643 SGT2YOR007C 1041 nt10.97□□□□□ -0.65
VPS3P23643 YSR3YKR053C 1215 nt10.96□□□□□ -0.65
VPS3P23643 YDR010CYDR010C 333 nt10.92□□□□□ -0.66
VPS3P23643 YMR244WYMR244W 1068 nt10.91□□□□□ -0.66
VPS3P23643 GLR1YPL091W 1452 nt10.89□□□□□ -0.67
VPS3P23643 AVT6YER119C 1347 nt10.88□□□□□ -0.67
VPS3P23643 YCR087WYCR087W 516 nt10.88□□□□□ -0.67
VPS3P23643 RET2YFR051C 1641 nt10.87□□□□□ -0.67
VPS3P23643 XYL2YLR070C 1071 nt10.86□□□□□ -0.67
VPS3P23643 GOR1YNL274C 1053 nt10.86□□□□□ -0.67
VPS3P23643 NDI1YML120C 1542 nt10.84□□□□□ -0.67
VPS3P23643 PHO89YBR296C 1725 nt10.84□□□□□ -0.67
VPS3P23643 RBG1YAL036C 1110 nt10.82□□□□□ -0.68
VPS3P23643 YCR102CYCR102C 1107 nt10.79□□□□□ -0.68
VPS3P23643 AIM45YPR004C 1035 nt10.79□□□□□ -0.68
VPS3P23643 CCA1YER168C 1641 nt10.79□□□□□ -0.68
VPS3P23643 RPM1RPM1 483 nt10.78□□□□□ -0.68
VPS3P23643 MRP20YDR405W 792 nt10.76□□□□□ -0.69
VPS3P23643 AGP1YCL025C 1902 nt10.76□□□□□ -0.69
VPS3P23643 SWE1YJL187C 2460 nt10.74□□□□□ -0.69
VPS3P23643 RBG2YGR173W 1107 nt10.72□□□□□ -0.69
VPS3P23643 DUT1YBR252W 444 nt10.71□□□□□ -0.69
VPS3P23643 COQ2YNR041C 1119 nt10.69□□□□□ -0.7
VPS3P23643 HSP60YLR259C 1719 nt10.69□□□□□ -0.7
VPS3P23643 YMR226CYMR226C 804 nt10.68□□□□□ -0.7
VPS3P23643 SFA1YDL168W 1161 nt10.67□□□□□ -0.7
VPS3P23643 MCH5YOR306C 1566 nt10.67□□□□□ -0.7
VPS3P23643 YHL019W-AYHL019W-A 594 nt10.65□□□□□ -0.7
VPS3P23643 DUS1YML080W 1272 nt10.63□□□□□ -0.71
VPS3P23643 RPL4BYDR012W 1089 nt10.62□□□□□ -0.71
VPS3P23643 NBP35YGL091C 987 nt10.62□□□□□ -0.71
VPS3P23643 TIR3YIL011W 810 nt10.62□□□□□ -0.71
VPS3P23643 RPL4AYBR031W 1089 nt10.62□□□□□ -0.71
VPS3P23643 ALG12YNR030W 1656 nt10.61□□□□□ -0.71
VPS3P23643 CLB6YGR109C 1143 nt10.6□□□□□ -0.71
VPS3P23643 YLR111WYLR111W 333 nt10.56□□□□□ -0.72
VPS3P23643 STR3YGL184C 1398 nt10.55□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms