Protein–RNA interactions for Protein: P0CX43

RPL1A, 60S ribosomal protein L1-A, yeastyeast

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL1AP0CX43 PCH2YBR186W 1695 nt10.43□□□□□ -0.74
RPL1AP0CX43 YLR415CYLR415C 339 nt10.42□□□□□ -0.74
RPL1AP0CX43 RRT12YCR045C 1476 nt10.42□□□□□ -0.74
RPL1AP0CX43 MSF1YPR047W 1410 nt10.41□□□□□ -0.74
RPL1AP0CX43 GAL1YBR020W 1587 nt10.41□□□□□ -0.74
RPL1AP0CX43 BIO4YNR057C 714 nt10.41□□□□□ -0.74
RPL1AP0CX43 NVJ2YPR091C 2313 nt10.4□□□□□ -0.74
RPL1AP0CX43 GUT2YIL155C 1950 nt10.37□□□□□ -0.75
RPL1AP0CX43 MIR1YJR077C 936 nt10.37□□□□□ -0.75
RPL1AP0CX43 THI74YDR438W 1113 nt10.36□□□□□ -0.75
RPL1AP0CX43 TRM5YHR070W 1500 nt10.36□□□□□ -0.75
RPL1AP0CX43 SIM1YIL123W 1431 nt10.35□□□□□ -0.75
RPL1AP0CX43 SPC25YER018C 666 nt10.35□□□□□ -0.75
RPL1AP0CX43 STB1YNL309W 1263 nt10.35□□□□□ -0.75
RPL1AP0CX43 CCT4YDL143W 1587 nt10.35□□□□□ -0.75
RPL1AP0CX43 YMR244WYMR244W 1068 nt10.33□□□□□ -0.76
RPL1AP0CX43 VPS75YNL246W 795 nt10.31□□□□□ -0.76
RPL1AP0CX43 YDR524C-BYDR524C-B 201 nt10.29□□□□□ -0.76
RPL1AP0CX43 GPI16YHR188C 1833 nt10.28□□□□□ -0.76
RPL1AP0CX43 VPS60YDR486C 690 nt10.26□□□□□ -0.77
RPL1AP0CX43 SWC5YBR231C 912 nt10.26□□□□□ -0.77
RPL1AP0CX43 PIB2YGL023C 1908 nt10.26□□□□□ -0.77
RPL1AP0CX43 ATF2YGR177C 1608 nt10.25□□□□□ -0.77
RPL1AP0CX43 DDR2YOL052C-A 186 nt10.25□□□□□ -0.77
RPL1AP0CX43 YFL067WYFL067W 528 nt10.23□□□□□ -0.77
RPL1AP0CX43 DAT1YML113W 747 nt10.22□□□□□ -0.77
RPL1AP0CX43 ALG3YBL082C 1377 nt10.22□□□□□ -0.77
RPL1AP0CX43 PAC11YDR488C 1602 nt10.22□□□□□ -0.77
RPL1AP0CX43 SPT8YLR055C 1809 nt10.21□□□□□ -0.77
RPL1AP0CX43 GLR1YPL091W 1452 nt10.21□□□□□ -0.78
RPL1AP0CX43 YDL086C-AYDL086C-A 435 nt10.2□□□□□ -0.78
RPL1AP0CX43 ERF2YLR246W 1080 nt10.2□□□□□ -0.78
RPL1AP0CX43 RTF1YGL244W 1677 nt10.18□□□□□ -0.78
RPL1AP0CX43 FEN2YCR028C 1539 nt10.18□□□□□ -0.78
RPL1AP0CX43 NCP1YHR042W 2076 nt10.16□□□□□ -0.78
RPL1AP0CX43 YGL034CYGL034C 366 nt10.16□□□□□ -0.78
RPL1AP0CX43 ANP1YEL036C 1503 nt10.16□□□□□ -0.78
RPL1AP0CX43 CRR1YLR213C 1269 nt10.15□□□□□ -0.78
RPL1AP0CX43 BOP3YNL042W 1191 nt10.15□□□□□ -0.78
RPL1AP0CX43 PAU7YAR020C 168 nt10.14□□□□□ -0.79
RPL1AP0CX43 UBA4YHR111W 1323 nt10.13□□□□□ -0.79
RPL1AP0CX43 RBG2YGR173W 1107 nt10.12□□□□□ -0.79
RPL1AP0CX43 SNG1YGR197C 1644 nt10.08□□□□□ -0.8
RPL1AP0CX43 YIR016WYIR016W 798 nt10.08□□□□□ -0.8
RPL1AP0CX43 TIM17YJL143W 477 nt10.07□□□□□ -0.8
RPL1AP0CX43 SHB17YKR043C 816 nt10.07□□□□□ -0.8
RPL1AP0CX43 NDI1YML120C 1542 nt10.07□□□□□ -0.8
RPL1AP0CX43 YSR3YKR053C 1215 nt10.06□□□□□ -0.8
RPL1AP0CX43 PTK1YKL198C 1989 nt10.06□□□□□ -0.8
RPL1AP0CX43 HEM12YDR047W 1089 nt10.04□□□□□ -0.8
RPL1AP0CX43 RBG1YAL036C 1110 nt10.02□□□□□ -0.81
RPL1AP0CX43 XYL2YLR070C 1071 nt10.02□□□□□ -0.81
RPL1AP0CX43 MIC10YCL057C-A 294 nt10.02□□□□□ -0.81
RPL1AP0CX43 YDR010CYDR010C 333 nt10□□□□□ -0.81
RPL1AP0CX43 LYS4YDR234W 2082 nt10□□□□□ -0.81
RPL1AP0CX43 SHM2YLR058C 1410 nt9.99□□□□□ -0.81
RPL1AP0CX43 RET2YFR051C 1641 nt9.93□□□□□ -0.82
RPL1AP0CX43 XDJ1YLR090W 1380 nt9.93□□□□□ -0.82
RPL1AP0CX43 YCR087WYCR087W 516 nt9.93□□□□□ -0.82
RPL1AP0CX43 NIT1YIL164C 600 nt9.93□□□□□ -0.82
RPL1AP0CX43 YMR226CYMR226C 804 nt9.93□□□□□ -0.82
RPL1AP0CX43 SGT2YOR007C 1041 nt9.92□□□□□ -0.82
RPL1AP0CX43 PHO89YBR296C 1725 nt9.91□□□□□ -0.82
RPL1AP0CX43 RPM1RPM1 483 nt9.91□□□□□ -0.82
RPL1AP0CX43 AIM45YPR004C 1035 nt9.91□□□□□ -0.82
RPL1AP0CX43 YJL225CYJL225C 5277 nt9.9□□□□□ -0.82
RPL1AP0CX43 SAM1YLR180W 1149 nt9.88□□□□□ -0.83
RPL1AP0CX43 MIC12YBR262C 321 nt9.85□□□□□ -0.83
RPL1AP0CX43 GDH3YAL062W 1374 nt9.85□□□□□ -0.83
RPL1AP0CX43 YFL054CYFL054C 1941 nt9.84□□□□□ -0.83
RPL1AP0CX43 BNA2YJR078W 1362 nt9.83□□□□□ -0.84
RPL1AP0CX43 RDN37-1RDN37-1 5354 nt9.81□□□□□ -0.84
RPL1AP0CX43 RDN37-2RDN37-2 5354 nt9.81□□□□□ -0.84
RPL1AP0CX43 YHR056W-AYHR056W-A 435 nt9.8□□□□□ -0.84
RPL1AP0CX43 MRP20YDR405W 792 nt9.79□□□□□ -0.84
RPL1AP0CX43 COQ2YNR041C 1119 nt9.78□□□□□ -0.84
RPL1AP0CX43 YGR201CYGR201C 678 nt9.77□□□□□ -0.85
RPL1AP0CX43 RAD51YER095W 1203 nt9.74□□□□□ -0.85
RPL1AP0CX43 YLR111WYLR111W 333 nt9.74□□□□□ -0.85
RPL1AP0CX43 HHO1YPL127C 777 nt9.73□□□□□ -0.85
RPL1AP0CX43 RAX1YOR301W 1308 nt9.73□□□□□ -0.85
RPL1AP0CX43 FRE6YLL051C 2139 nt9.72□□□□□ -0.85
RPL1AP0CX43 SFA1YDL168W 1161 nt9.71□□□□□ -0.86
RPL1AP0CX43 AVT6YER119C 1347 nt9.69□□□□□ -0.86
RPL1AP0CX43 RPL4BYDR012W 1089 nt9.66□□□□□ -0.86
RPL1AP0CX43 RPL4AYBR031W 1089 nt9.66□□□□□ -0.86
RPL1AP0CX43 YCR102CYCR102C 1107 nt9.65□□□□□ -0.86
RPL1AP0CX43 SWE1YJL187C 2460 nt9.64□□□□□ -0.87
RPL1AP0CX43 YHL019W-AYHL019W-A 594 nt9.63□□□□□ -0.87
RPL1AP0CX43 GOR1YNL274C 1053 nt9.63□□□□□ -0.87
RPL1AP0CX43 RAD23YEL037C 1197 nt9.62□□□□□ -0.87
RPL1AP0CX43 RPS14BYJL191W 417 nt9.62□□□□□ -0.87
RPL1AP0CX43 YLR437C-AYLR437C-A 228 nt9.61□□□□□ -0.87
RPL1AP0CX43 SDH5YOL071W 489 nt9.61□□□□□ -0.87
RPL1AP0CX43 CLB6YGR109C 1143 nt9.6□□□□□ -0.87
RPL1AP0CX43 YNR029CYNR029C 1290 nt9.59□□□□□ -0.87
RPL1AP0CX43 STE4YOR212W 1272 nt9.59□□□□□ -0.87
RPL1AP0CX43 YLR349WYLR349W 507 nt9.58□□□□□ -0.88
RPL1AP0CX43 CAB5YDR196C 726 nt9.56□□□□□ -0.88
RPL1AP0CX43 DUT1YBR252W 444 nt9.56□□□□□ -0.88
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms