Protein–RNA interactions for Protein: Q9Y543

HES2, Transcription factor HES-2, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES2Q9Y543 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.48■■□□□ 1.51
HES2Q9Y543 AC105265.2-201ENST00000467189 838 ntBASIC24.48■■□□□ 1.51
HES2Q9Y543 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.48■■□□□ 1.51
HES2Q9Y543 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
HES2Q9Y543 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
HES2Q9Y543 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.48■■□□□ 1.51
HES2Q9Y543 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.48■■□□□ 1.51
HES2Q9Y543 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HES2Q9Y543 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.48■■□□□ 1.51
HES2Q9Y543 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HES2Q9Y543 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HES2Q9Y543 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HES2Q9Y543 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.47■■□□□ 1.51
HES2Q9Y543 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HES2Q9Y543 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
HES2Q9Y543 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
HES2Q9Y543 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
HES2Q9Y543 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HES2Q9Y543 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.47■■□□□ 1.51
HES2Q9Y543 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
HES2Q9Y543 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.47■■□□□ 1.51
HES2Q9Y543 pRNA.6-201ENST00000610482 90 ntBASIC24.47■■□□□ 1.51
HES2Q9Y543 pRNA.5-201ENST00000612139 90 ntBASIC24.47■■□□□ 1.51
HES2Q9Y543 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.47■■□□□ 1.51
HES2Q9Y543 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.47■■□□□ 1.51
HES2Q9Y543 pRNA.11-201ENST00000618423 90 ntBASIC24.47■■□□□ 1.51
HES2Q9Y543 pRNA.13-201ENST00000619112 90 ntBASIC24.47■■□□□ 1.51
HES2Q9Y543 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
HES2Q9Y543 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HES2Q9Y543 AC008764.7-201ENST00000593779 1081 ntBASIC24.46■■□□□ 1.51
HES2Q9Y543 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HES2Q9Y543 AC136469.2-201ENST00000623944 1028 ntBASIC24.46■■□□□ 1.51
HES2Q9Y543 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
HES2Q9Y543 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.46■■□□□ 1.51
HES2Q9Y543 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HES2Q9Y543 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
HES2Q9Y543 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
HES2Q9Y543 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.45■■□□□ 1.5
HES2Q9Y543 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HES2Q9Y543 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.45■■□□□ 1.5
HES2Q9Y543 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.45■■□□□ 1.5
HES2Q9Y543 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HES2Q9Y543 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
HES2Q9Y543 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
HES2Q9Y543 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
HES2Q9Y543 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HES2Q9Y543 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HES2Q9Y543 AC091305.1-201ENST00000479476 895 ntBASIC24.44■■□□□ 1.5
HES2Q9Y543 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HES2Q9Y543 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.43■■□□□ 1.5
HES2Q9Y543 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
HES2Q9Y543 AC141586.4-201ENST00000624558 1573 ntBASIC24.43■■□□□ 1.5
HES2Q9Y543 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.43■■□□□ 1.5
HES2Q9Y543 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
HES2Q9Y543 ABCB10P4-201ENST00000566803 2184 ntBASIC24.43■■□□□ 1.5
HES2Q9Y543 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
HES2Q9Y543 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
HES2Q9Y543 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HES2Q9Y543 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HES2Q9Y543 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.42■■□□□ 1.5
HES2Q9Y543 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HES2Q9Y543 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.42■■□□□ 1.5
HES2Q9Y543 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.42■■□□□ 1.5
HES2Q9Y543 CA15P2-201ENST00000611168 834 ntBASIC24.42■■□□□ 1.5
HES2Q9Y543 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.42■■□□□ 1.5
HES2Q9Y543 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
HES2Q9Y543 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HES2Q9Y543 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HES2Q9Y543 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HES2Q9Y543 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
HES2Q9Y543 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.41■■□□□ 1.5
HES2Q9Y543 AC099791.1-201ENST00000416440 715 ntBASIC24.41■■□□□ 1.5
HES2Q9Y543 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.41■■□□□ 1.5
HES2Q9Y543 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.41■■□□□ 1.5
HES2Q9Y543 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.41■■□□□ 1.5
HES2Q9Y543 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HES2Q9Y543 RASA4CP-201ENST00000424092 1398 ntBASIC24.41■■□□□ 1.5
HES2Q9Y543 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HES2Q9Y543 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HES2Q9Y543 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
HES2Q9Y543 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
HES2Q9Y543 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HES2Q9Y543 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HES2Q9Y543 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.4■■□□□ 1.5
HES2Q9Y543 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.4■■□□□ 1.5
HES2Q9Y543 AC027682.1-201ENST00000562846 899 ntBASIC24.4■■□□□ 1.5
HES2Q9Y543 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HES2Q9Y543 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.4■■□□□ 1.5
HES2Q9Y543 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.39■■□□□ 1.5
HES2Q9Y543 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
HES2Q9Y543 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
HES2Q9Y543 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
HES2Q9Y543 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.39■■□□□ 1.49
HES2Q9Y543 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HES2Q9Y543 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HES2Q9Y543 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HES2Q9Y543 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HES2Q9Y543 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
HES2Q9Y543 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HES2Q9Y543 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms