Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 IMD2YHR216W 1572 nt4.15□□□□□ -1.74
RRP40Q08285 YHL034W-AYHL034W-A 462 nt4.15□□□□□ -1.75
RRP40Q08285 NMD4YLR363C 657 nt4.15□□□□□ -1.75
RRP40Q08285 RPC19YNL113W 429 nt4.15□□□□□ -1.75
RRP40Q08285 ARC40YBR234C 1155 nt4.15□□□□□ -1.75
RRP40Q08285 SBE2YDR351W 2595 nt4.14□□□□□ -1.75
RRP40Q08285 LYP1YNL268W 1836 nt4.14□□□□□ -1.75
RRP40Q08285 EAR1YMR171C 1653 nt4.14□□□□□ -1.75
RRP40Q08285 NAT2YGR147C 867 nt4.14□□□□□ -1.75
RRP40Q08285 ISY1YJR050W 708 nt4.14□□□□□ -1.75
RRP40Q08285 PAU17YLL025W 375 nt4.14□□□□□ -1.75
RRP40Q08285 GTR1YML121W 933 nt4.14□□□□□ -1.75
RRP40Q08285 YMR085WYMR085W 1299 nt4.14□□□□□ -1.75
RRP40Q08285 YNG1YOR064C 660 nt4.14□□□□□ -1.75
RRP40Q08285 YOR292CYOR292C 930 nt4.14□□□□□ -1.75
RRP40Q08285 NNK1YKL171W 2787 nt4.14□□□□□ -1.75
RRP40Q08285 CBP1YJL209W 1965 nt4.14□□□□□ -1.75
RRP40Q08285 PHO84YML123C 1764 nt4.14□□□□□ -1.75
RRP40Q08285 HOM3YER052C 1584 nt4.14□□□□□ -1.75
RRP40Q08285 CDC15YAR019C 2925 nt4.14□□□□□ -1.75
RRP40Q08285 SLD2YKL108W 1362 nt4.14□□□□□ -1.75
RRP40Q08285 RKM2YDR198C 1440 nt4.13□□□□□ -1.75
RRP40Q08285 SUM1YDR310C 3189 nt4.13□□□□□ -1.75
RRP40Q08285 MKS1YNL076W 1755 nt4.13□□□□□ -1.75
RRP40Q08285 YCR006CYCR006C 474 nt4.13□□□□□ -1.75
RRP40Q08285 RNA15YGL044C 891 nt4.13□□□□□ -1.75
RRP40Q08285 FBP1YLR377C 1047 nt4.13□□□□□ -1.75
RRP40Q08285 OSW5YMR148W 447 nt4.13□□□□□ -1.75
RRP40Q08285 CUZ1YNL155W 825 nt4.13□□□□□ -1.75
RRP40Q08285 SKG6YHR149C 2205 nt4.13□□□□□ -1.75
RRP40Q08285 PFK1YGR240C 2964 nt4.12□□□□□ -1.75
RRP40Q08285 GSY1YFR015C 2127 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)CtK(CUU)C 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)D1tK(CUU)D1 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)D2tK(CUU)D2 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)E1tK(CUU)E1 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)E2tK(CUU)E2 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)FtK(CUU)F 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)G1tK(CUU)G1 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)G2tK(CUU)G2 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)G3tK(CUU)G3 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)ItK(CUU)I 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)JtK(CUU)J 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)KtK(CUU)K 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)MtK(CUU)M 73 nt4.12□□□□□ -1.75
RRP40Q08285 tK(CUU)PtK(CUU)P 73 nt4.12□□□□□ -1.75
RRP40Q08285 FRA2YGL220W 363 nt4.12□□□□□ -1.75
RRP40Q08285 GPI12YMR281W 915 nt4.12□□□□□ -1.75
RRP40Q08285 MVD1YNR043W 1191 nt4.12□□□□□ -1.75
RRP40Q08285 PAH1YMR165C 2589 nt4.12□□□□□ -1.75
RRP40Q08285 ISR1YPR106W 1332 nt4.12□□□□□ -1.75
RRP40Q08285 AZR1YGR224W 1842 nt4.11□□□□□ -1.75
RRP40Q08285 ARP10YDR106W 855 nt4.11□□□□□ -1.75
RRP40Q08285 COQ4YDR204W 1008 nt4.11□□□□□ -1.75
RRP40Q08285 DAM1YGR113W 1032 nt4.11□□□□□ -1.75
RRP40Q08285 NTR2YKR022C 969 nt4.11□□□□□ -1.75
RRP40Q08285 RRT7YLL030C 342 nt4.11□□□□□ -1.75
RRP40Q08285 YNL217WYNL217W 981 nt4.11□□□□□ -1.75
RRP40Q08285 TIF5YPR041W 1218 nt4.11□□□□□ -1.75
RRP40Q08285 IML2YJL082W 2196 nt4.11□□□□□ -1.75
RRP40Q08285 IMA3YIL172C 1770 nt4.11□□□□□ -1.75
RRP40Q08285 IMA4YJL221C 1770 nt4.11□□□□□ -1.75
RRP40Q08285 THS1YIL078W 2205 nt4.11□□□□□ -1.75
RRP40Q08285 RRN11YML043C 1524 nt4.11□□□□□ -1.75
RRP40Q08285 PRD1YCL057W 2139 nt4.1□□□□□ -1.75
RRP40Q08285 snR7-SsnR7-S 179 nt4.1□□□□□ -1.75
RRP40Q08285 GCV1YDR019C 1203 nt4.1□□□□□ -1.75
RRP40Q08285 YKL169CYKL169C 384 nt4.1□□□□□ -1.75
RRP40Q08285 PML1YLR016C 615 nt4.1□□□□□ -1.75
RRP40Q08285 TAF11YML015C 1041 nt4.1□□□□□ -1.75
RRP40Q08285 RPL15BYMR121C 615 nt4.1□□□□□ -1.75
RRP40Q08285 RRN9YMR270C 1098 nt4.1□□□□□ -1.75
RRP40Q08285 TOM7YNL070W 183 nt4.1□□□□□ -1.75
RRP40Q08285 JHD2YJR119C 2187 nt4.09□□□□□ -1.75
RRP40Q08285 DCV1YFR012W 609 nt4.09□□□□□ -1.75
RRP40Q08285 YOR379CYOR379C 339 nt4.09□□□□□ -1.75
RRP40Q08285 RMI1YPL024W 726 nt4.09□□□□□ -1.75
RRP40Q08285 YCL022CYCL022C 516 nt4.09□□□□□ -1.75
RRP40Q08285 FPK1YNR047W 2682 nt4.09□□□□□ -1.75
RRP40Q08285 YIL001WYIL001W 1542 nt4.09□□□□□ -1.75
RRP40Q08285 YOL153CYOL153C 1746 nt4.09□□□□□ -1.76
RRP40Q08285 NUP2YLR335W 2163 nt4.09□□□□□ -1.76
RRP40Q08285 STB2YMR053C 2553 nt4.08□□□□□ -1.76
RRP40Q08285 PER1YCR044C 1074 nt4.08□□□□□ -1.76
RRP40Q08285 RXT3YDL076C 885 nt4.08□□□□□ -1.76
RRP40Q08285 KRE28YDR532C 1158 nt4.08□□□□□ -1.76
RRP40Q08285 FLO8YER109C 2400 nt4.08□□□□□ -1.76
RRP40Q08285 TVP38YKR088C 1014 nt4.08□□□□□ -1.76
RRP40Q08285 NKP2YLR315W 462 nt4.08□□□□□ -1.76
RRP40Q08285 TDA5YLR426W 981 nt4.08□□□□□ -1.76
RRP40Q08285 ROT1YMR200W 771 nt4.08□□□□□ -1.76
RRP40Q08285 POP4YBR257W 840 nt4.08□□□□□ -1.76
RRP40Q08285 PHM7YOL084W 2976 nt4.07□□□□□ -1.76
RRP40Q08285 MMR1YLR190W 1476 nt4.07□□□□□ -1.76
RRP40Q08285 OCA4YCR095C 1089 nt4.07□□□□□ -1.76
RRP40Q08285 TRM8YDL201W 861 nt4.07□□□□□ -1.76
RRP40Q08285 NUP42YDR192C 1293 nt4.07□□□□□ -1.76
RRP40Q08285 YJL218WYJL218W 591 nt4.07□□□□□ -1.76
RRP40Q08285 CNB1YKL190W 528 nt4.07□□□□□ -1.76
RRP40Q08285 RRP40YOL142W 723 nt4.07□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 71.6 ms