Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM11AP58511 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM11AP58511 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM11AP58511 AC139795.1-202ENST00000500444 432 ntBASIC20.69■□□□□ 0.9
SMIM11AP58511 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM11AP58511 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SMIM11AP58511 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
SMIM11AP58511 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMIM11AP58511 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.68■□□□□ 0.9
SMIM11AP58511 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM11AP58511 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.68■□□□□ 0.9
SMIM11AP58511 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.68■□□□□ 0.9
SMIM11AP58511 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM11AP58511 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM11AP58511 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SMIM11AP58511 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM11AP58511 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.67■□□□□ 0.9
SMIM11AP58511 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM11AP58511 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM11AP58511 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
SMIM11AP58511 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.67■□□□□ 0.9
SMIM11AP58511 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM11AP58511 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM11AP58511 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM11AP58511 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM11AP58511 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM11AP58511 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM11AP58511 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM11AP58511 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM11AP58511 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM11AP58511 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM11AP58511 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM11AP58511 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.66■□□□□ 0.9
SMIM11AP58511 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.66■□□□□ 0.9
SMIM11AP58511 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM11AP58511 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM11AP58511 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SMIM11AP58511 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM11AP58511 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM11AP58511 CLDN5-201ENST00000403084 2357 ntBASIC20.65■□□□□ 0.9
SMIM11AP58511 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM11AP58511 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM11AP58511 KRT18P60-201ENST00000312876 1297 ntBASIC20.65■□□□□ 0.9
SMIM11AP58511 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.65■□□□□ 0.9
SMIM11AP58511 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.65■□□□□ 0.9
SMIM11AP58511 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SMIM11AP58511 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM11AP58511 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMIM11AP58511 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM11AP58511 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMIM11AP58511 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMIM11AP58511 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMIM11AP58511 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SMIM11AP58511 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMIM11AP58511 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMIM11AP58511 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMIM11AP58511 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.64■□□□□ 0.9
SMIM11AP58511 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM11AP58511 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM11AP58511 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.64■□□□□ 0.89
SMIM11AP58511 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM11AP58511 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM11AP58511 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM11AP58511 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM11AP58511 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM11AP58511 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM11AP58511 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM11AP58511 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
SMIM11AP58511 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.63■□□□□ 0.89
SMIM11AP58511 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.63■□□□□ 0.89
SMIM11AP58511 AC242852.2-201ENST00000615738 1807 ntBASIC20.63■□□□□ 0.89
SMIM11AP58511 LINC00565-201ENST00000562710 2331 ntBASIC20.63■□□□□ 0.89
SMIM11AP58511 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SMIM11AP58511 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.63■□□□□ 0.89
SMIM11AP58511 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM11AP58511 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM11AP58511 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
SMIM11AP58511 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.62■□□□□ 0.89
SMIM11AP58511 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.62■□□□□ 0.89
SMIM11AP58511 AC079630.1-202ENST00000618127 1840 ntBASIC20.62■□□□□ 0.89
SMIM11AP58511 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM11AP58511 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM11AP58511 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SMIM11AP58511 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM11AP58511 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMIM11AP58511 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM11AP58511 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM11AP58511 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM11AP58511 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.62■□□□□ 0.89
SMIM11AP58511 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.62■□□□□ 0.89
SMIM11AP58511 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SMIM11AP58511 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SMIM11AP58511 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMIM11AP58511 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM11AP58511 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.61■□□□□ 0.89
SMIM11AP58511 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
SMIM11AP58511 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SMIM11AP58511 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM11AP58511 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM11AP58511 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms