Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VRK2Q86Y07 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VRK2Q86Y07 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
VRK2Q86Y07 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.88■□□□□ 0.93
VRK2Q86Y07 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 SNX5-217ENST00000606557 1087 ntBASIC20.85■□□□□ 0.93
VRK2Q86Y07 AC137630.3-201ENST00000607245 391 ntBASIC20.85■□□□□ 0.93
VRK2Q86Y07 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VRK2Q86Y07 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
VRK2Q86Y07 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
VRK2Q86Y07 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.83■□□□□ 0.93
VRK2Q86Y07 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VRK2Q86Y07 AC079630.1-202ENST00000618127 1840 ntBASIC20.83■□□□□ 0.92
VRK2Q86Y07 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VRK2Q86Y07 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
VRK2Q86Y07 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.82■□□□□ 0.92
VRK2Q86Y07 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.82■□□□□ 0.92
VRK2Q86Y07 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
VRK2Q86Y07 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
VRK2Q86Y07 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms