Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
POLR2J3Q9H1A7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
POLR2J3Q9H1A7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR2J3Q9H1A7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
POLR2J3Q9H1A7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
POLR2J3Q9H1A7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
POLR2J3Q9H1A7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR2J3Q9H1A7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
POLR2J3Q9H1A7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR2J3Q9H1A7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR2J3Q9H1A7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR2J3Q9H1A7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR2J3Q9H1A7 AC233723.2-201ENST00000623798 2106 ntBASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 ALDH1A3-203ENST00000557963 1670 ntBASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR2J3Q9H1A7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR2J3Q9H1A7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR2J3Q9H1A7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR2J3Q9H1A7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR2J3Q9H1A7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
POLR2J3Q9H1A7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
POLR2J3Q9H1A7 DUSP8P3-201ENST00000399571 1760 ntBASIC20.86■□□□□ 0.93
POLR2J3Q9H1A7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
POLR2J3Q9H1A7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
POLR2J3Q9H1A7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 KRT18P24-201ENST00000344739 1156 ntBASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR2J3Q9H1A7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 DUX4L18-201ENST00000553347 1267 ntBASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 AC120024.1-201ENST00000562672 995 ntBASIC20.83■□□□□ 0.93
POLR2J3Q9H1A7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
POLR2J3Q9H1A7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.83■□□□□ 0.92
POLR2J3Q9H1A7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.83■□□□□ 0.92
POLR2J3Q9H1A7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
POLR2J3Q9H1A7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR2J3Q9H1A7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms