Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SLC9A3P48764 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC9A3P48764 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC9A3P48764 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3P48764 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3P48764 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SLC9A3P48764 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3P48764 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC9A3P48764 AC074183.2-201ENST00000623112 922 ntBASIC20.67■□□□□ 0.9
SLC9A3P48764 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC9A3P48764 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3P48764 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3P48764 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3P48764 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3P48764 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3P48764 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC9A3P48764 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC9A3P48764 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC9A3P48764 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC9A3P48764 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC9A3P48764 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLC9A3P48764 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC9A3P48764 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC9A3P48764 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC9A3P48764 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SLC9A3P48764 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC9A3P48764 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLC9A3P48764 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SLC9A3P48764 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SLC9A3P48764 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC9A3P48764 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC9A3P48764 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC9A3P48764 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC9A3P48764 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC9A3P48764 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC9A3P48764 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC9A3P48764 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC9A3P48764 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC9A3P48764 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC9A3P48764 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC9A3P48764 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SLC9A3P48764 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
SLC9A3P48764 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SLC9A3P48764 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC9A3P48764 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3P48764 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3P48764 AC131274.2-201ENST00000580697 1507 ntBASIC20.63■□□□□ 0.89
SLC9A3P48764 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC9A3P48764 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3P48764 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3P48764 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3P48764 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3P48764 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC9A3P48764 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC9A3P48764 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3P48764 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLC9A3P48764 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC9A3P48764 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SLC9A3P48764 BHLHE23-202ENST00000612929 1109 ntBASIC20.62■□□□□ 0.89
SLC9A3P48764 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC9A3P48764 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC9A3P48764 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC9A3P48764 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC9A3P48764 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC9A3P48764 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
SLC9A3P48764 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC9A3P48764 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC9A3P48764 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3P48764 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC9A3P48764 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3P48764 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC9A3P48764 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3P48764 ATP5G2P3-201ENST00000429083 425 ntBASIC20.61■□□□□ 0.89
SLC9A3P48764 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.61■□□□□ 0.89
SLC9A3P48764 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC9A3P48764 ANOS2P-203ENST00000472227 1816 ntBASIC20.61■□□□□ 0.89
SLC9A3P48764 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SLC9A3P48764 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3P48764 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3P48764 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SLC9A3P48764 AC092068.2-201ENST00000590491 1708 ntBASIC20.61■□□□□ 0.89
SLC9A3P48764 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC9A3P48764 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC9A3P48764 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3P48764 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3P48764 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC9A3P48764 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3P48764 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3P48764 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC9A3P48764 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3P48764 AC004987.1-201ENST00000428627 508 ntBASIC20.6■□□□□ 0.89
SLC9A3P48764 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC9A3P48764 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3P48764 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC9A3P48764 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC9A3P48764 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3P48764 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC9A3P48764 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SLC9A3P48764 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3P48764 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms