Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.64■■■□□ 2.5
RXRBP28702 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
RXRBP28702 KRT18P6-201ENST00000555540 1265 ntBASIC30.64■■■□□ 2.5
RXRBP28702 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC30.64■■■□□ 2.5
RXRBP28702 WT1-AS_3.1-201ENST00000613262 234 ntBASIC30.64■■■□□ 2.5
RXRBP28702 BID-214ENST00000617586 542 ntTSL 5 BASIC30.64■■■□□ 2.5
RXRBP28702 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
RXRBP28702 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RXRBP28702 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RXRBP28702 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
RXRBP28702 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RXRBP28702 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC30.63■■■□□ 2.49
RXRBP28702 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RXRBP28702 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
RXRBP28702 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC30.62■■■□□ 2.49
RXRBP28702 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RXRBP28702 KRT18P61-201ENST00000585825 1298 ntBASIC30.62■■■□□ 2.49
RXRBP28702 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RXRBP28702 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
RXRBP28702 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RXRBP28702 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
RXRBP28702 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.6■■■□□ 2.49
RXRBP28702 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RXRBP28702 AC142086.2-201ENST00000569753 217 ntBASIC30.6■■■□□ 2.49
RXRBP28702 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RXRBP28702 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RXRBP28702 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
RXRBP28702 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RXRBP28702 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC30.59■■■□□ 2.49
RXRBP28702 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
RXRBP28702 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RXRBP28702 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
RXRBP28702 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RXRBP28702 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC30.58■■■□□ 2.49
RXRBP28702 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RXRBP28702 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RXRBP28702 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RXRBP28702 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC30.58■■■□□ 2.49
RXRBP28702 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RXRBP28702 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.49
RXRBP28702 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RXRBP28702 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RXRBP28702 FAM201B-201ENST00000458407 597 ntBASIC30.57■■■□□ 2.48
RXRBP28702 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.57■■■□□ 2.48
RXRBP28702 MIR4651-201ENST00000582622 73 ntBASIC30.57■■■□□ 2.48
RXRBP28702 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
RXRBP28702 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
RXRBP28702 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RXRBP28702 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RXRBP28702 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC30.56■■■□□ 2.48
RXRBP28702 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC30.56■■■□□ 2.48
RXRBP28702 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
RXRBP28702 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC30.55■■■□□ 2.48
RXRBP28702 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.55■■■□□ 2.48
RXRBP28702 AC008687.6-201ENST00000596318 630 ntBASIC30.55■■■□□ 2.48
RXRBP28702 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.55■■■□□ 2.48
RXRBP28702 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RXRBP28702 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.54■■■□□ 2.48
RXRBP28702 AP005435.1-201ENST00000529293 1178 ntBASIC30.54■■■□□ 2.48
RXRBP28702 GAMT-205ENST00000640762 751 ntTSL 5 BASIC30.54■■■□□ 2.48
RXRBP28702 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RXRBP28702 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RXRBP28702 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.53■■■□□ 2.48
RXRBP28702 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.53■■■□□ 2.48
RXRBP28702 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC30.53■■■□□ 2.48
RXRBP28702 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.53■■■□□ 2.48
RXRBP28702 pRNA.6-201ENST00000610482 90 ntBASIC30.53■■■□□ 2.48
RXRBP28702 pRNA.5-201ENST00000612139 90 ntBASIC30.53■■■□□ 2.48
RXRBP28702 pRNA.11-201ENST00000618423 90 ntBASIC30.53■■■□□ 2.48
RXRBP28702 pRNA.13-201ENST00000619112 90 ntBASIC30.53■■■□□ 2.48
RXRBP28702 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.53■■■□□ 2.48
RXRBP28702 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
RXRBP28702 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.53■■■□□ 2.48
RXRBP28702 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RXRBP28702 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC30.52■■■□□ 2.48
RXRBP28702 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC30.52■■■□□ 2.48
RXRBP28702 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RXRBP28702 MIR663A-201ENST00000385250 93 ntBASIC30.52■■■□□ 2.48
RXRBP28702 METTL26-203ENST00000397664 604 ntTSL 2 BASIC30.52■■■□□ 2.48
RXRBP28702 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RXRBP28702 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RXRBP28702 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC30.51■■■□□ 2.47
RXRBP28702 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
RXRBP28702 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RXRBP28702 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC30.51■■■□□ 2.47
RXRBP28702 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.51■■■□□ 2.47
RXRBP28702 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC30.51■■■□□ 2.47
RXRBP28702 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC30.51■■■□□ 2.47
RXRBP28702 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC30.5■■■□□ 2.47
RXRBP28702 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
RXRBP28702 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
RXRBP28702 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RXRBP28702 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RXRBP28702 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
RXRBP28702 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC30.49■■■□□ 2.47
RXRBP28702 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RXRBP28702 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.49■■■□□ 2.47
RXRBP28702 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RXRBP28702 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RXRBP28702 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms