Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FNDC9Q8TBE3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC9Q8TBE3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 MIR3621-201ENST00000580529 85 ntBASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC9Q8TBE3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 AL356740.2-201ENST00000601559 647 ntBASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC9Q8TBE3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.52■□□□□ 0.88
FNDC9Q8TBE3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC9Q8TBE3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC9Q8TBE3 AC008406.3-201ENST00000620001 1374 ntBASIC20.52■□□□□ 0.88
FNDC9Q8TBE3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.52■□□□□ 0.88
FNDC9Q8TBE3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.52■□□□□ 0.88
FNDC9Q8TBE3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.52■□□□□ 0.88
FNDC9Q8TBE3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC9Q8TBE3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC9Q8TBE3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
FNDC9Q8TBE3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
FNDC9Q8TBE3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
FNDC9Q8TBE3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FNDC9Q8TBE3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FNDC9Q8TBE3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.51■□□□□ 0.87
FNDC9Q8TBE3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.51■□□□□ 0.87
FNDC9Q8TBE3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FNDC9Q8TBE3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FNDC9Q8TBE3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FNDC9Q8TBE3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FNDC9Q8TBE3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
FNDC9Q8TBE3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FNDC9Q8TBE3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.5■□□□□ 0.87
FNDC9Q8TBE3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.5■□□□□ 0.87
FNDC9Q8TBE3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
FNDC9Q8TBE3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.5■□□□□ 0.87
FNDC9Q8TBE3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.5■□□□□ 0.87
FNDC9Q8TBE3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
FNDC9Q8TBE3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FNDC9Q8TBE3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
FNDC9Q8TBE3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
FNDC9Q8TBE3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FNDC9Q8TBE3 AC131281.2-201ENST00000520478 145 ntBASIC20.49■□□□□ 0.87
FNDC9Q8TBE3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FNDC9Q8TBE3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FNDC9Q8TBE3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FNDC9Q8TBE3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FNDC9Q8TBE3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FNDC9Q8TBE3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FNDC9Q8TBE3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.47■□□□□ 0.87
FNDC9Q8TBE3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FNDC9Q8TBE3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FNDC9Q8TBE3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FNDC9Q8TBE3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FNDC9Q8TBE3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.47■□□□□ 0.87
FNDC9Q8TBE3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FNDC9Q8TBE3 AC005703.6-201ENST00000623265 1329 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms