Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.43■■■□□ 2.3
LINC00116Q8NCU8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
LINC00116Q8NCU8 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.43■■■□□ 2.3
LINC00116Q8NCU8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
LINC00116Q8NCU8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC29.42■■■□□ 2.3
LINC00116Q8NCU8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.42■■■□□ 2.3
LINC00116Q8NCU8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.42■■■□□ 2.3
LINC00116Q8NCU8 AC022517.1-201ENST00000592429 346 ntBASIC29.42■■■□□ 2.3
LINC00116Q8NCU8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LINC00116Q8NCU8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 BX842568.3-201ENST00000418104 571 ntBASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 MIR3181-201ENST00000578512 73 ntBASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 AC241377.3-202ENST00000626088 1088 ntBASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 AC241585.3-202ENST00000628937 1088 ntBASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 AC245100.8-202ENST00000629247 1058 ntBASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LINC00116Q8NCU8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.4■■■□□ 2.3
LINC00116Q8NCU8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LINC00116Q8NCU8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.4■■■□□ 2.3
LINC00116Q8NCU8 GRAMD4P2-201ENST00000423297 1097 ntBASIC29.4■■■□□ 2.3
LINC00116Q8NCU8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.4■■■□□ 2.3
LINC00116Q8NCU8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.4■■■□□ 2.3
LINC00116Q8NCU8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LINC00116Q8NCU8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
LINC00116Q8NCU8 AC034268.1-201ENST00000441047 882 ntBASIC29.39■■■□□ 2.3
LINC00116Q8NCU8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
LINC00116Q8NCU8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.39■■■□□ 2.3
LINC00116Q8NCU8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LINC00116Q8NCU8 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.38■■■□□ 2.29
LINC00116Q8NCU8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
LINC00116Q8NCU8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
LINC00116Q8NCU8 KRT18P5-201ENST00000436075 1291 ntBASIC29.38■■■□□ 2.29
LINC00116Q8NCU8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.38■■■□□ 2.29
LINC00116Q8NCU8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
LINC00116Q8NCU8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
LINC00116Q8NCU8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
LINC00116Q8NCU8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LINC00116Q8NCU8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
LINC00116Q8NCU8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LINC00116Q8NCU8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.37■■■□□ 2.29
LINC00116Q8NCU8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC29.37■■■□□ 2.29
LINC00116Q8NCU8 AC092437.1-201ENST00000624794 1048 ntBASIC29.37■■■□□ 2.29
LINC00116Q8NCU8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
LINC00116Q8NCU8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 AC009086.3-201ENST00000623486 1008 ntBASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
LINC00116Q8NCU8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
LINC00116Q8NCU8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
LINC00116Q8NCU8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC29.35■■■□□ 2.29
LINC00116Q8NCU8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
LINC00116Q8NCU8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
LINC00116Q8NCU8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC29.34■■■□□ 2.29
LINC00116Q8NCU8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
LINC00116Q8NCU8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LINC00116Q8NCU8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.34■■■□□ 2.29
LINC00116Q8NCU8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
LINC00116Q8NCU8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LINC00116Q8NCU8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
LINC00116Q8NCU8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
LINC00116Q8NCU8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 SLC6A10P-202ENST00000431994 2058 ntBASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
LINC00116Q8NCU8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 DUX4L2-201ENST00000561772 1275 ntBASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 DUX4L6-201ENST00000626483 1275 ntBASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 DUX4L1-201ENST00000627662 1275 ntBASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 DUX4L8-201ENST00000629013 1275 ntBASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 DUX4L3-201ENST00000630187 1275 ntBASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 DUX4L7-201ENST00000630678 1275 ntBASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms