Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NPAS3Q8IXF0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.88■■□□□ 1.41
NPAS3Q8IXF0 CA15P2-201ENST00000611168 834 ntBASIC23.88■■□□□ 1.41
NPAS3Q8IXF0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS3Q8IXF0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS3Q8IXF0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
NPAS3Q8IXF0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS3Q8IXF0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.87■■□□□ 1.41
NPAS3Q8IXF0 AC011298.3-201ENST00000615796 283 ntBASIC23.87■■□□□ 1.41
NPAS3Q8IXF0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS3Q8IXF0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS3Q8IXF0 RASA4CP-201ENST00000424092 1398 ntBASIC23.87■■□□□ 1.41
NPAS3Q8IXF0 AL022069.1-201ENST00000568025 1636 ntBASIC23.86■■□□□ 1.41
NPAS3Q8IXF0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
NPAS3Q8IXF0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.86■■□□□ 1.41
NPAS3Q8IXF0 AC027682.1-201ENST00000562846 899 ntBASIC23.86■■□□□ 1.41
NPAS3Q8IXF0 AL138724.1-201ENST00000606771 1088 ntBASIC23.86■■□□□ 1.41
NPAS3Q8IXF0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NPAS3Q8IXF0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NPAS3Q8IXF0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NPAS3Q8IXF0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NPAS3Q8IXF0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 MIR6821-201ENST00000617625 74 ntBASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.85■■□□□ 1.41
NPAS3Q8IXF0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPAS3Q8IXF0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPAS3Q8IXF0 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.84■■□□□ 1.41
NPAS3Q8IXF0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.84■■□□□ 1.41
NPAS3Q8IXF0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.83■■□□□ 1.41
NPAS3Q8IXF0 C17orf82-201ENST00000623772 1530 ntBASIC23.83■■□□□ 1.41
NPAS3Q8IXF0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NPAS3Q8IXF0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NPAS3Q8IXF0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.82■■□□□ 1.4
NPAS3Q8IXF0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.82■■□□□ 1.4
NPAS3Q8IXF0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
NPAS3Q8IXF0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPAS3Q8IXF0 AC097381.1-201ENST00000429019 1296 ntBASIC23.82■■□□□ 1.4
NPAS3Q8IXF0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.82■■□□□ 1.4
NPAS3Q8IXF0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.82■■□□□ 1.4
NPAS3Q8IXF0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 AC008764.7-201ENST00000593779 1081 ntBASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.81■■□□□ 1.4
NPAS3Q8IXF0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NPAS3Q8IXF0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
NPAS3Q8IXF0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.8■■□□□ 1.4
NPAS3Q8IXF0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS3Q8IXF0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS3Q8IXF0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS3Q8IXF0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS3Q8IXF0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NPAS3Q8IXF0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.79■■□□□ 1.4
NPAS3Q8IXF0 AC087623.3-201ENST00000607047 1098 ntBASIC23.79■■□□□ 1.4
NPAS3Q8IXF0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS3Q8IXF0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPAS3Q8IXF0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 AC099791.1-201ENST00000416440 715 ntBASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 AC241377.3-202ENST00000626088 1088 ntBASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 AC241585.3-202ENST00000628937 1088 ntBASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 AC245100.8-202ENST00000629247 1058 ntBASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 DUSP8P4-201ENST00000399538 1761 ntBASIC23.78■■□□□ 1.4
NPAS3Q8IXF0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 AC006455.2-201ENST00000429931 906 ntBASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 AC136469.2-201ENST00000623944 1028 ntBASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NPAS3Q8IXF0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NPAS3Q8IXF0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NPAS3Q8IXF0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NPAS3Q8IXF0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NPAS3Q8IXF0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.76■■□□□ 1.39
NPAS3Q8IXF0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.76■■□□□ 1.39
NPAS3Q8IXF0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms