Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
NDST4Q9H3R1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
NDST4Q9H3R1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.08■■□□□ 1.6
NDST4Q9H3R1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
NDST4Q9H3R1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NDST4Q9H3R1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.07■■□□□ 1.6
NDST4Q9H3R1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
NDST4Q9H3R1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NDST4Q9H3R1 AC011551.1-201ENST00000614101 683 ntBASIC25.07■■□□□ 1.6
NDST4Q9H3R1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.07■■□□□ 1.6
NDST4Q9H3R1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.07■■□□□ 1.6
NDST4Q9H3R1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
NDST4Q9H3R1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NDST4Q9H3R1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NDST4Q9H3R1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NDST4Q9H3R1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NDST4Q9H3R1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.06■■□□□ 1.6
NDST4Q9H3R1 AC139795.1-202ENST00000500444 432 ntBASIC25.06■■□□□ 1.6
NDST4Q9H3R1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NDST4Q9H3R1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NDST4Q9H3R1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.06■■□□□ 1.6
NDST4Q9H3R1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NDST4Q9H3R1 AC068473.5-201ENST00000616428 2072 ntBASIC25.05■■□□□ 1.6
NDST4Q9H3R1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NDST4Q9H3R1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
NDST4Q9H3R1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NDST4Q9H3R1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NDST4Q9H3R1 AC022616.5-201ENST00000518796 181 ntBASIC25.04■■□□□ 1.6
NDST4Q9H3R1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
NDST4Q9H3R1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.04■■□□□ 1.6
NDST4Q9H3R1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NDST4Q9H3R1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.03■■□□□ 1.6
NDST4Q9H3R1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
NDST4Q9H3R1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NDST4Q9H3R1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.03■■□□□ 1.6
NDST4Q9H3R1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NDST4Q9H3R1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.03■■□□□ 1.6
NDST4Q9H3R1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
NDST4Q9H3R1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.02■■□□□ 1.6
NDST4Q9H3R1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
NDST4Q9H3R1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NDST4Q9H3R1 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.02■■□□□ 1.6
NDST4Q9H3R1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NDST4Q9H3R1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NDST4Q9H3R1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
NDST4Q9H3R1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NDST4Q9H3R1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NDST4Q9H3R1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.02■■□□□ 1.6
NDST4Q9H3R1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NDST4Q9H3R1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NDST4Q9H3R1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.01■■□□□ 1.59
NDST4Q9H3R1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
NDST4Q9H3R1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NDST4Q9H3R1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
NDST4Q9H3R1 AL022069.1-201ENST00000568025 1636 ntBASIC25.01■■□□□ 1.59
NDST4Q9H3R1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25■■□□□ 1.59
NDST4Q9H3R1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NDST4Q9H3R1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NDST4Q9H3R1 AC004987.1-201ENST00000428627 508 ntBASIC25■■□□□ 1.59
NDST4Q9H3R1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NDST4Q9H3R1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25■■□□□ 1.59
NDST4Q9H3R1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
NDST4Q9H3R1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NDST4Q9H3R1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25■■□□□ 1.59
NDST4Q9H3R1 AC012676.1-201ENST00000574705 1949 ntBASIC25■■□□□ 1.59
NDST4Q9H3R1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NDST4Q9H3R1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
NDST4Q9H3R1 ATP5G2P3-201ENST00000429083 425 ntBASIC24.99■■□□□ 1.59
NDST4Q9H3R1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.99■■□□□ 1.59
NDST4Q9H3R1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.99■■□□□ 1.59
NDST4Q9H3R1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.99■■□□□ 1.59
NDST4Q9H3R1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
NDST4Q9H3R1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.97■■□□□ 1.59
NDST4Q9H3R1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
NDST4Q9H3R1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.97■■□□□ 1.59
NDST4Q9H3R1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
NDST4Q9H3R1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NDST4Q9H3R1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.97■■□□□ 1.59
NDST4Q9H3R1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
NDST4Q9H3R1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms