Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC29.51■■■□□ 2.31
CCDC30Q5VVM6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCDC30Q5VVM6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.51■■■□□ 2.31
CCDC30Q5VVM6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCDC30Q5VVM6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCDC30Q5VVM6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
CCDC30Q5VVM6 MIR3621-201ENST00000580529 85 ntBASIC29.5■■■□□ 2.31
CCDC30Q5VVM6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.5■■■□□ 2.31
CCDC30Q5VVM6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC30Q5VVM6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC30Q5VVM6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
CCDC30Q5VVM6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC30Q5VVM6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC30Q5VVM6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
CCDC30Q5VVM6 AL161729.1-201ENST00000604104 1402 ntBASIC29.49■■■□□ 2.31
CCDC30Q5VVM6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.49■■■□□ 2.31
CCDC30Q5VVM6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC29.49■■■□□ 2.31
CCDC30Q5VVM6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC30Q5VVM6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.49■■■□□ 2.31
CCDC30Q5VVM6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
CCDC30Q5VVM6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC30Q5VVM6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC30Q5VVM6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.48■■■□□ 2.31
CCDC30Q5VVM6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.48■■■□□ 2.31
CCDC30Q5VVM6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.48■■■□□ 2.31
CCDC30Q5VVM6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC30Q5VVM6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC30Q5VVM6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.47■■■□□ 2.31
CCDC30Q5VVM6 AL356740.2-201ENST00000601559 647 ntBASIC29.47■■■□□ 2.31
CCDC30Q5VVM6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC30Q5VVM6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC30Q5VVM6 AC135731.1-201ENST00000569415 2548 ntBASIC29.46■■■□□ 2.31
CCDC30Q5VVM6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC30Q5VVM6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC29.46■■■□□ 2.31
CCDC30Q5VVM6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.46■■■□□ 2.31
CCDC30Q5VVM6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.45■■■□□ 2.31
CCDC30Q5VVM6 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.45■■■□□ 2.31
CCDC30Q5VVM6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.45■■■□□ 2.31
CCDC30Q5VVM6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.45■■■□□ 2.31
CCDC30Q5VVM6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.45■■■□□ 2.3
CCDC30Q5VVM6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CCDC30Q5VVM6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC30Q5VVM6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC30Q5VVM6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC30Q5VVM6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.42■■■□□ 2.3
CCDC30Q5VVM6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC30Q5VVM6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.42■■■□□ 2.3
CCDC30Q5VVM6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
CCDC30Q5VVM6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC30Q5VVM6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC30Q5VVM6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.41■■■□□ 2.3
CCDC30Q5VVM6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.41■■■□□ 2.3
CCDC30Q5VVM6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.41■■■□□ 2.3
CCDC30Q5VVM6 AC005703.6-201ENST00000623265 1329 ntBASIC29.41■■■□□ 2.3
CCDC30Q5VVM6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC30Q5VVM6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CCDC30Q5VVM6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC30Q5VVM6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC30Q5VVM6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC30Q5VVM6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC30Q5VVM6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC30Q5VVM6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC30Q5VVM6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.39■■■□□ 2.3
CCDC30Q5VVM6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
CCDC30Q5VVM6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC30Q5VVM6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.29
CCDC30Q5VVM6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC30Q5VVM6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC30Q5VVM6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC30Q5VVM6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC30Q5VVM6 AC008406.3-201ENST00000620001 1374 ntBASIC29.38■■■□□ 2.29
CCDC30Q5VVM6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.37■■■□□ 2.29
CCDC30Q5VVM6 AC131281.2-201ENST00000520478 145 ntBASIC29.37■■■□□ 2.29
CCDC30Q5VVM6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.37■■■□□ 2.29
CCDC30Q5VVM6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC30Q5VVM6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC30Q5VVM6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC30Q5VVM6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC30Q5VVM6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC30Q5VVM6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC29.36■■■□□ 2.29
CCDC30Q5VVM6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC30Q5VVM6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms