Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 MAL13YGR288W 1422 nt7.21□□□□□ -1.26
RKR1Q04781 CAF4YKR036C 1932 nt7.21□□□□□ -1.26
RKR1Q04781 HMS2YJR147W 1077 nt7.2□□□□□ -1.26
RKR1Q04781 RRP40YOL142W 723 nt7.2□□□□□ -1.26
RKR1Q04781 GSY2YLR258W 2118 nt7.2□□□□□ -1.26
RKR1Q04781 TNA1YGR260W 1605 nt7.2□□□□□ -1.26
RKR1Q04781 SGE1YPR198W 1632 nt7.2□□□□□ -1.26
RKR1Q04781 YER145C-AYER145C-A 438 nt7.2□□□□□ -1.26
RKR1Q04781 TRS33YOR115C 807 nt7.2□□□□□ -1.26
RKR1Q04781 MTF1YMR228W 1026 nt7.19□□□□□ -1.26
RKR1Q04781 POR1YNL055C 852 nt7.19□□□□□ -1.26
RKR1Q04781 YCR023CYCR023C 1836 nt7.19□□□□□ -1.26
RKR1Q04781 YCR085WYCR085W 354 nt7.18□□□□□ -1.26
RKR1Q04781 ISY1YJR050W 708 nt7.18□□□□□ -1.26
RKR1Q04781 CTR3YLR411W 726 nt7.18□□□□□ -1.26
RKR1Q04781 MTR10YOR160W 2919 nt7.17□□□□□ -1.26
RKR1Q04781 KAR2YJL034W 2049 nt7.17□□□□□ -1.26
RKR1Q04781 RSA4YCR072C 1548 nt7.17□□□□□ -1.26
RKR1Q04781 SNA2YDR525W-A 240 nt7.16□□□□□ -1.26
RKR1Q04781 NKP2YLR315W 462 nt7.16□□□□□ -1.26
RKR1Q04781 TAF11YML015C 1041 nt7.16□□□□□ -1.26
RKR1Q04781 RER1YCL001W 567 nt7.16□□□□□ -1.26
RKR1Q04781 GCN20YFR009W 2259 nt7.16□□□□□ -1.26
RKR1Q04781 DCD1YHR144C 939 nt7.16□□□□□ -1.26
RKR1Q04781 YKL223WYKL223W 333 nt7.16□□□□□ -1.26
RKR1Q04781 RXT3YDL076C 885 nt7.14□□□□□ -1.27
RKR1Q04781 tS(AGA)D3tS(AGA)D3 83 nt7.14□□□□□ -1.27
RKR1Q04781 SPG4YMR107W 348 nt7.14□□□□□ -1.27
RKR1Q04781 snR10snR10 245 nt7.14□□□□□ -1.27
RKR1Q04781 UBX7YBR273C 1311 nt7.14□□□□□ -1.27
RKR1Q04781 GDH2YDL215C 3279 nt7.13□□□□□ -1.27
RKR1Q04781 FRA2YGL220W 363 nt7.13□□□□□ -1.27
RKR1Q04781 MAS1YLR163C 1389 nt7.13□□□□□ -1.27
RKR1Q04781 GSY1YFR015C 2127 nt7.13□□□□□ -1.27
RKR1Q04781 SIA1YOR137C 1869 nt7.12□□□□□ -1.27
RKR1Q04781 MET12YPL023C 1974 nt7.12□□□□□ -1.27
RKR1Q04781 KGD1YIL125W 3045 nt7.12□□□□□ -1.27
RKR1Q04781 OXP1YKL215C 3861 nt7.12□□□□□ -1.27
RKR1Q04781 MID2YLR332W 1131 nt7.12□□□□□ -1.27
RKR1Q04781 SOL1YNR034W 966 nt7.12□□□□□ -1.27
RKR1Q04781 NMD3YHR170W 1557 nt7.11□□□□□ -1.27
RKR1Q04781 FAT3YKL187C 2253 nt7.11□□□□□ -1.27
RKR1Q04781 BIT2YBR270C 1638 nt7.11□□□□□ -1.27
RKR1Q04781 ASN2YGR124W 1719 nt7.1□□□□□ -1.27
RKR1Q04781 YDL032WYDL032W 312 nt7.1□□□□□ -1.27
RKR1Q04781 YOR379CYOR379C 339 nt7.1□□□□□ -1.27
RKR1Q04781 PHM7YOL084W 2976 nt7.09□□□□□ -1.27
RKR1Q04781 RMD9YGL107C 1941 nt7.09□□□□□ -1.27
RKR1Q04781 AIM7YDR063W 450 nt7.08□□□□□ -1.28
RKR1Q04781 API2YDR525W 330 nt7.08□□□□□ -1.28
RKR1Q04781 MCM6YGL201C 3054 nt7.08□□□□□ -1.28
RKR1Q04781 YEL077CYEL077C 3834 nt7.08□□□□□ -1.28
RKR1Q04781 CPR4YCR069W 957 nt7.07□□□□□ -1.28
RKR1Q04781 COA3YJL062W-A 258 nt7.07□□□□□ -1.28
RKR1Q04781 QCR2YPR191W 1107 nt7.07□□□□□ -1.28
RKR1Q04781 IMD3YLR432W 1572 nt7.06□□□□□ -1.28
RKR1Q04781 MHF2YDL160C-A 243 nt7.06□□□□□ -1.28
RKR1Q04781 YDR161WYDR161W 1164 nt7.06□□□□□ -1.28
RKR1Q04781 RSC2YLR357W 2670 nt7.05□□□□□ -1.28
RKR1Q04781 RPC53YDL150W 1269 nt7.04□□□□□ -1.28
RKR1Q04781 YMD8YML038C 1329 nt7.04□□□□□ -1.28
RKR1Q04781 ARH1YDR376W 1482 nt7.04□□□□□ -1.28
RKR1Q04781 FKH2YNL068C 2589 nt7.04□□□□□ -1.28
RKR1Q04781 CPS1YJL172W 1731 nt7.04□□□□□ -1.28
RKR1Q04781 PDX3YBR035C 687 nt7.03□□□□□ -1.28
RKR1Q04781 SNF8YPL002C 702 nt7.03□□□□□ -1.28
RKR1Q04781 VHS2YIL135C 1311 nt7.03□□□□□ -1.28
RKR1Q04781 SSB2YNL209W 1842 nt7.02□□□□□ -1.29
RKR1Q04781 THS1YIL078W 2205 nt7.01□□□□□ -1.29
RKR1Q04781 ELP2YGR200C 2367 nt7.01□□□□□ -1.29
RKR1Q04781 PCT1YGR202C 1275 nt7□□□□□ -1.29
RKR1Q04781 MRS3YJL133W 945 nt7□□□□□ -1.29
RKR1Q04781 RPL43BYJR094W-A 279 nt7□□□□□ -1.29
RKR1Q04781 VID27YNL212W 2349 nt7□□□□□ -1.29
RKR1Q04781 TFG1YGR186W 2208 nt7□□□□□ -1.29
RKR1Q04781 CPR1YDR155C 489 nt6.99□□□□□ -1.29
RKR1Q04781 TPK1YJL164C 1194 nt6.99□□□□□ -1.29
RKR1Q04781 AIM21YIR003W 2040 nt6.98□□□□□ -1.29
RKR1Q04781 SUL2YLR092W 2682 nt6.98□□□□□ -1.29
RKR1Q04781 RCK2YLR248W 1833 nt6.98□□□□□ -1.29
RKR1Q04781 RML2YEL050C 1182 nt6.98□□□□□ -1.29
RKR1Q04781 YIL165CYIL165C 360 nt6.98□□□□□ -1.29
RKR1Q04781 ACS1YAL054C 2142 nt6.97□□□□□ -1.29
RKR1Q04781 NTA1YJR062C 1374 nt6.97□□□□□ -1.29
RKR1Q04781 HES1YOR237W 1305 nt6.97□□□□□ -1.29
RKR1Q04781 SSY5YJL156C 2100 nt6.97□□□□□ -1.29
RKR1Q04781 ERG20YJL167W 1059 nt6.97□□□□□ -1.29
RKR1Q04781 UTP11YKL099C 753 nt6.97□□□□□ -1.29
RKR1Q04781 PDR10YOR328W 4695 nt6.97□□□□□ -1.29
RKR1Q04781 FRS1YLR060W 1788 nt6.97□□□□□ -1.29
RKR1Q04781 RGT1YKL038W 3513 nt6.96□□□□□ -1.29
RKR1Q04781 ARC1YGL105W 1131 nt6.96□□□□□ -1.29
RKR1Q04781 COX4YGL187C 468 nt6.96□□□□□ -1.29
RKR1Q04781 YPR109WYPR109W 885 nt6.96□□□□□ -1.29
RKR1Q04781 YGL063C-AYGL063C-A 150 nt6.95□□□□□ -1.3
RKR1Q04781 RPS4BYHR203C 786 nt6.95□□□□□ -1.3
RKR1Q04781 RPS4AYJR145C 786 nt6.95□□□□□ -1.3
RKR1Q04781 MRS2YOR334W 1413 nt6.95□□□□□ -1.3
RKR1Q04781 MCM2YBL023C 2607 nt6.95□□□□□ -1.3
RKR1Q04781 HAP1YLR256W 4509 nt6.95□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms