Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNRNP200O75643 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNRNP200O75643 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.15■■□□□ 1.14
SNRNP200O75643 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNRNP200O75643 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNRNP200O75643 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNRNP200O75643 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.15■■□□□ 1.14
SNRNP200O75643 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.15■■□□□ 1.14
SNRNP200O75643 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.15■■□□□ 1.14
SNRNP200O75643 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.15■■□□□ 1.14
SNRNP200O75643 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNRNP200O75643 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.15■■□□□ 1.14
SNRNP200O75643 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SNRNP200O75643 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SNRNP200O75643 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SNRNP200O75643 MIR6724-1-201ENST00000616420 92 ntBASIC22.14■■□□□ 1.13
SNRNP200O75643 MIR6724-2-201ENST00000616483 92 ntBASIC22.14■■□□□ 1.13
SNRNP200O75643 MIR6724-4-201ENST00000617390 92 ntBASIC22.14■■□□□ 1.13
SNRNP200O75643 MIR6724-3-201ENST00000622482 92 ntBASIC22.14■■□□□ 1.13
SNRNP200O75643 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SNRNP200O75643 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SNRNP200O75643 LINC00543-201ENST00000567234 1845 ntBASIC22.14■■□□□ 1.13
SNRNP200O75643 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SNRNP200O75643 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.14■■□□□ 1.13
SNRNP200O75643 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNRNP200O75643 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.13■■□□□ 1.13
SNRNP200O75643 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.13■■□□□ 1.13
SNRNP200O75643 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.13■■□□□ 1.13
SNRNP200O75643 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.13■■□□□ 1.13
SNRNP200O75643 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.13■■□□□ 1.13
SNRNP200O75643 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SNRNP200O75643 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.13■■□□□ 1.13
SNRNP200O75643 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.13■■□□□ 1.13
SNRNP200O75643 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNRNP200O75643 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.13■■□□□ 1.13
SNRNP200O75643 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNRNP200O75643 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNRNP200O75643 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.12■■□□□ 1.13
SNRNP200O75643 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SNRNP200O75643 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNRNP200O75643 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
SNRNP200O75643 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNRNP200O75643 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SNRNP200O75643 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.12■■□□□ 1.13
SNRNP200O75643 AC010997.5-201ENST00000609182 354 ntBASIC22.12■■□□□ 1.13
SNRNP200O75643 LINC01124-201ENST00000409786 2117 ntBASIC22.11■■□□□ 1.13
SNRNP200O75643 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.11■■□□□ 1.13
SNRNP200O75643 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SNRNP200O75643 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.11■■□□□ 1.13
SNRNP200O75643 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SNRNP200O75643 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.11■■□□□ 1.13
SNRNP200O75643 AL512631.2-201ENST00000604634 923 ntBASIC22.11■■□□□ 1.13
SNRNP200O75643 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.11■■□□□ 1.13
SNRNP200O75643 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SNRNP200O75643 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNRNP200O75643 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SNRNP200O75643 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SNRNP200O75643 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNRNP200O75643 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNRNP200O75643 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SNRNP200O75643 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SNRNP200O75643 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.1■■□□□ 1.13
SNRNP200O75643 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.1■■□□□ 1.13
SNRNP200O75643 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SNRNP200O75643 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNRNP200O75643 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNRNP200O75643 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.09■■□□□ 1.13
SNRNP200O75643 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SNRNP200O75643 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.09■■□□□ 1.13
SNRNP200O75643 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SNRNP200O75643 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SNRNP200O75643 AL117332.1-201ENST00000622628 974 ntBASIC22.09■■□□□ 1.13
SNRNP200O75643 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.09■■□□□ 1.13
SNRNP200O75643 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SNRNP200O75643 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNRNP200O75643 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
SNRNP200O75643 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.08■■□□□ 1.13
SNRNP200O75643 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNRNP200O75643 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.08■■□□□ 1.13
SNRNP200O75643 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.08■■□□□ 1.13
SNRNP200O75643 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNRNP200O75643 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNRNP200O75643 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SNRNP200O75643 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SNRNP200O75643 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.08■■□□□ 1.12
SNRNP200O75643 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.07■■□□□ 1.12
SNRNP200O75643 AC004448.1-201ENST00000458332 883 ntBASIC22.07■■□□□ 1.12
SNRNP200O75643 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.07■■□□□ 1.12
SNRNP200O75643 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
SNRNP200O75643 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNRNP200O75643 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNRNP200O75643 MIR4466-201ENST00000606121 54 ntBASIC22.07■■□□□ 1.12
SNRNP200O75643 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.06■■□□□ 1.12
SNRNP200O75643 MIR3621-201ENST00000580529 85 ntBASIC22.06■■□□□ 1.12
SNRNP200O75643 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNRNP200O75643 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SNRNP200O75643 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
SNRNP200O75643 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SNRNP200O75643 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNRNP200O75643 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms