Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.61■□□□□ 0.25
TRGV1A0A0A0MS02 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV1A0A0A0MS02 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 PVT1_1.1-201ENST00000615125 194 ntBASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV1A0A0A0MS02 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV1A0A0A0MS02 AC004812.2-201ENST00000611079 2094 ntBASIC16.58■□□□□ 0.25
TRGV1A0A0A0MS02 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV1A0A0A0MS02 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
TRGV1A0A0A0MS02 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV1A0A0A0MS02 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV1A0A0A0MS02 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV1A0A0A0MS02 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 THA1P-201ENST00000590384 1145 ntBASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 KRT8P33-201ENST00000508125 1423 ntBASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV1A0A0A0MS02 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 ABCB10P4-201ENST00000566803 2184 ntBASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 AC120024.1-201ENST00000562672 995 ntBASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRGV1A0A0A0MS02 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 YBX1P4-201ENST00000392794 808 ntBASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 PKD1P6-201ENST00000343738 4769 ntBASIC16.56■□□□□ 0.24
TRGV1A0A0A0MS02 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRGV1A0A0A0MS02 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV1A0A0A0MS02 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV1A0A0A0MS02 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
TRGV1A0A0A0MS02 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRGV1A0A0A0MS02 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRGV1A0A0A0MS02 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV1A0A0A0MS02 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.55■□□□□ 0.24
TRGV1A0A0A0MS02 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms