Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
XRN1Q8IZH2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC32.68■■■□□ 2.82
XRN1Q8IZH2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC32.68■■■□□ 2.82
XRN1Q8IZH2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
XRN1Q8IZH2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC32.68■■■□□ 2.82
XRN1Q8IZH2 AC099791.1-201ENST00000416440 715 ntBASIC32.67■■■□□ 2.82
XRN1Q8IZH2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
XRN1Q8IZH2 AL138724.1-201ENST00000606771 1088 ntBASIC32.67■■■□□ 2.82
XRN1Q8IZH2 AC142086.6-201ENST00000621154 1765 ntBASIC32.67■■■□□ 2.82
XRN1Q8IZH2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
XRN1Q8IZH2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
XRN1Q8IZH2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
XRN1Q8IZH2 AC092171.4-201ENST00000609130 632 ntBASIC32.66■■■□□ 2.82
XRN1Q8IZH2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
XRN1Q8IZH2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
XRN1Q8IZH2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
XRN1Q8IZH2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
XRN1Q8IZH2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
XRN1Q8IZH2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC32.65■■■□□ 2.82
XRN1Q8IZH2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
XRN1Q8IZH2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC32.65■■■□□ 2.82
XRN1Q8IZH2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
XRN1Q8IZH2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.65■■■□□ 2.82
XRN1Q8IZH2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
XRN1Q8IZH2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
XRN1Q8IZH2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC32.64■■■□□ 2.82
XRN1Q8IZH2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
XRN1Q8IZH2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
XRN1Q8IZH2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
XRN1Q8IZH2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC32.64■■■□□ 2.82
XRN1Q8IZH2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
XRN1Q8IZH2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC32.63■■■□□ 2.81
XRN1Q8IZH2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC32.63■■■□□ 2.81
XRN1Q8IZH2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC32.63■■■□□ 2.81
XRN1Q8IZH2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC32.63■■■□□ 2.81
XRN1Q8IZH2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
XRN1Q8IZH2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC32.63■■■□□ 2.81
XRN1Q8IZH2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC32.63■■■□□ 2.81
XRN1Q8IZH2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC32.63■■■□□ 2.81
XRN1Q8IZH2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC32.63■■■□□ 2.81
XRN1Q8IZH2 AC099791.2-201ENST00000605725 427 ntBASIC32.63■■■□□ 2.81
XRN1Q8IZH2 AC136469.2-201ENST00000623944 1028 ntBASIC32.63■■■□□ 2.81
XRN1Q8IZH2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
XRN1Q8IZH2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC32.62■■■□□ 2.81
XRN1Q8IZH2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
XRN1Q8IZH2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
XRN1Q8IZH2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC32.62■■■□□ 2.81
XRN1Q8IZH2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC32.62■■■□□ 2.81
XRN1Q8IZH2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC32.62■■■□□ 2.81
XRN1Q8IZH2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
XRN1Q8IZH2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
XRN1Q8IZH2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
XRN1Q8IZH2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
XRN1Q8IZH2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
XRN1Q8IZH2 C17orf82-201ENST00000623772 1530 ntBASIC32.61■■■□□ 2.81
XRN1Q8IZH2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
XRN1Q8IZH2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
XRN1Q8IZH2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC32.6■■■□□ 2.81
XRN1Q8IZH2 AC090192.1-201ENST00000517740 490 ntBASIC32.6■■■□□ 2.81
XRN1Q8IZH2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
XRN1Q8IZH2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
XRN1Q8IZH2 IRS3P-201ENST00000223076 1006 ntBASIC32.6■■■□□ 2.81
XRN1Q8IZH2 ERN1-208ENST00000606895 2068 ntBASIC32.59■■■□□ 2.81
XRN1Q8IZH2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
XRN1Q8IZH2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC32.59■■■□□ 2.81
XRN1Q8IZH2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC32.58■■■□□ 2.81
XRN1Q8IZH2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC32.58■■■□□ 2.81
XRN1Q8IZH2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC32.58■■■□□ 2.81
XRN1Q8IZH2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
XRN1Q8IZH2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.81
XRN1Q8IZH2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC32.57■■■□□ 2.81
XRN1Q8IZH2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
XRN1Q8IZH2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC32.57■■■□□ 2.81
XRN1Q8IZH2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC32.57■■■□□ 2.8
XRN1Q8IZH2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
XRN1Q8IZH2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
XRN1Q8IZH2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
XRN1Q8IZH2 AC008764.7-201ENST00000593779 1081 ntBASIC32.57■■■□□ 2.8
XRN1Q8IZH2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC32.57■■■□□ 2.8
XRN1Q8IZH2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
XRN1Q8IZH2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
XRN1Q8IZH2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
XRN1Q8IZH2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC32.56■■■□□ 2.8
XRN1Q8IZH2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC32.56■■■□□ 2.8
XRN1Q8IZH2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
XRN1Q8IZH2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
XRN1Q8IZH2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC32.56■■■□□ 2.8
XRN1Q8IZH2 IKBKGP1-201ENST00000612193 1073 ntBASIC32.56■■■□□ 2.8
XRN1Q8IZH2 AL031602.1-201ENST00000633169 911 ntBASIC32.56■■■□□ 2.8
XRN1Q8IZH2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
XRN1Q8IZH2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC32.55■■■□□ 2.8
XRN1Q8IZH2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
XRN1Q8IZH2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
XRN1Q8IZH2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
XRN1Q8IZH2 AC006455.2-201ENST00000429931 906 ntBASIC32.54■■■□□ 2.8
XRN1Q8IZH2 RARRES2P11-201ENST00000635158 484 ntBASIC32.54■■■□□ 2.8
XRN1Q8IZH2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC32.54■■■□□ 2.8
XRN1Q8IZH2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC32.54■■■□□ 2.8
XRN1Q8IZH2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
XRN1Q8IZH2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC32.54■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms