Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN16Q9Y5I7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN16Q9Y5I7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN16Q9Y5I7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN16Q9Y5I7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN16Q9Y5I7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN16Q9Y5I7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN16Q9Y5I7 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN16Q9Y5I7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN16Q9Y5I7 BX664725.1-201ENST00000438252 379 ntBASIC21.75■■□□□ 1.07
CLDN16Q9Y5I7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN16Q9Y5I7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN16Q9Y5I7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN16Q9Y5I7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN16Q9Y5I7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.74■■□□□ 1.07
CLDN16Q9Y5I7 GUSBP5-201ENST00000418136 578 ntBASIC21.74■■□□□ 1.07
CLDN16Q9Y5I7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.74■■□□□ 1.07
CLDN16Q9Y5I7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN16Q9Y5I7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
CLDN16Q9Y5I7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN16Q9Y5I7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CLDN16Q9Y5I7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN16Q9Y5I7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN16Q9Y5I7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLDN16Q9Y5I7 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN16Q9Y5I7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN16Q9Y5I7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.73■■□□□ 1.07
CLDN16Q9Y5I7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN16Q9Y5I7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CLDN16Q9Y5I7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN16Q9Y5I7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN16Q9Y5I7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.72■■□□□ 1.07
CLDN16Q9Y5I7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.71■■□□□ 1.07
CLDN16Q9Y5I7 AC131274.2-201ENST00000580697 1507 ntBASIC21.7■■□□□ 1.07
CLDN16Q9Y5I7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 MIR4787-201ENST00000607364 84 ntBASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 AC135731.1-201ENST00000569415 2548 ntBASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.7■■□□□ 1.06
CLDN16Q9Y5I7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN16Q9Y5I7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN16Q9Y5I7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN16Q9Y5I7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN16Q9Y5I7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN16Q9Y5I7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN16Q9Y5I7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN16Q9Y5I7 AL139125.2-201ENST00000623134 1869 ntBASIC21.67■■□□□ 1.06
CLDN16Q9Y5I7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN16Q9Y5I7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN16Q9Y5I7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.67■■□□□ 1.06
CLDN16Q9Y5I7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.67■■□□□ 1.06
CLDN16Q9Y5I7 KRT125P-201ENST00000546827 989 ntBASIC21.67■■□□□ 1.06
CLDN16Q9Y5I7 AC092028.1-203ENST00000608262 953 ntBASIC21.67■■□□□ 1.06
CLDN16Q9Y5I7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.66■■□□□ 1.06
CLDN16Q9Y5I7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN16Q9Y5I7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN16Q9Y5I7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.66■■□□□ 1.06
CLDN16Q9Y5I7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN16Q9Y5I7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN16Q9Y5I7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN16Q9Y5I7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN16Q9Y5I7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN16Q9Y5I7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN16Q9Y5I7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CLDN16Q9Y5I7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN16Q9Y5I7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.65■■□□□ 1.06
CLDN16Q9Y5I7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN16Q9Y5I7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.65■■□□□ 1.06
CLDN16Q9Y5I7 SNX5-217ENST00000606557 1087 ntBASIC21.65■■□□□ 1.06
CLDN16Q9Y5I7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms