Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 tN(GUU)GtN(GUU)G 74 nt4.73□□□□□ -1.65
SSH1P38353 tN(GUU)KtN(GUU)K 74 nt4.73□□□□□ -1.65
SSH1P38353 tN(GUU)LtN(GUU)L 74 nt4.73□□□□□ -1.65
SSH1P38353 tN(GUU)N1tN(GUU)N1 74 nt4.73□□□□□ -1.65
SSH1P38353 tN(GUU)N2tN(GUU)N2 74 nt4.73□□□□□ -1.65
SSH1P38353 NQM1YGR043C 1002 nt4.73□□□□□ -1.65
SSH1P38353 tN(GUU)O1tN(GUU)O1 74 nt4.73□□□□□ -1.65
SSH1P38353 tN(GUU)O2tN(GUU)O2 74 nt4.73□□□□□ -1.65
SSH1P38353 tN(GUU)PtN(GUU)P 74 nt4.73□□□□□ -1.65
SSH1P38353 YHR193C-AYHR193C-A 375 nt4.73□□□□□ -1.65
SSH1P38353 MND2YIR025W 1107 nt4.73□□□□□ -1.65
SSH1P38353 SPG4YMR107W 348 nt4.73□□□□□ -1.65
SSH1P38353 LST8YNL006W 912 nt4.73□□□□□ -1.65
SSH1P38353 FOL1YNL256W 2475 nt4.73□□□□□ -1.65
SSH1P38353 NGR1YBR212W 2019 nt4.73□□□□□ -1.65
SSH1P38353 STP4YDL048C 1473 nt4.73□□□□□ -1.65
SSH1P38353 MPP10YJR002W 1782 nt4.73□□□□□ -1.65
SSH1P38353 SFI1YLL003W 2841 nt4.73□□□□□ -1.65
SSH1P38353 FET3YMR058W 1911 nt4.72□□□□□ -1.65
SSH1P38353 ARR3YPR201W 1215 nt4.72□□□□□ -1.65
SSH1P38353 PAP1YKR002W 1707 nt4.72□□□□□ -1.65
SSH1P38353 RIM15YFL033C 5313 nt4.71□□□□□ -1.66
SSH1P38353 BRF1YGR246C 1791 nt4.71□□□□□ -1.66
SSH1P38353 FHL1YPR104C 2811 nt4.71□□□□□ -1.66
SSH1P38353 YDL121CYDL121C 450 nt4.71□□□□□ -1.66
SSH1P38353 HSX1tR(CCU)J 72 nt4.71□□□□□ -1.66
SSH1P38353 MRPL15YLR312W-A 762 nt4.71□□□□□ -1.66
SSH1P38353 STE50YCL032W 1041 nt4.71□□□□□ -1.66
SSH1P38353 FZO1YBR179C 2568 nt4.71□□□□□ -1.66
SSH1P38353 GDB1YPR184W 4611 nt4.71□□□□□ -1.66
SSH1P38353 GIP2YER054C 1647 nt4.71□□□□□ -1.66
SSH1P38353 RPT2YDL007W 1314 nt4.71□□□□□ -1.66
SSH1P38353 GLT1YDL171C 6438 nt4.7□□□□□ -1.66
SSH1P38353 RPL12AYEL054C 498 nt4.7□□□□□ -1.66
SSH1P38353 CBP4YGR174C 513 nt4.7□□□□□ -1.66
SSH1P38353 RPS19BYNL302C 435 nt4.7□□□□□ -1.66
SSH1P38353 GPM3YOL056W 912 nt4.7□□□□□ -1.66
SSH1P38353 DOA1YKL213C 2148 nt4.7□□□□□ -1.66
SSH1P38353 QRI1YDL103C 1434 nt4.7□□□□□ -1.66
SSH1P38353 VPS72YDR485C 2388 nt4.7□□□□□ -1.66
SSH1P38353 QDR1YIL120W 1692 nt4.7□□□□□ -1.66
SSH1P38353 VHS1YDR247W 1386 nt4.69□□□□□ -1.66
SSH1P38353 YDL034WYDL034W 345 nt4.69□□□□□ -1.66
SSH1P38353 YLL059CYLL059C 507 nt4.69□□□□□ -1.66
SSH1P38353 TFS1YLR178C 660 nt4.69□□□□□ -1.66
SSH1P38353 YPL102CYPL102C 303 nt4.69□□□□□ -1.66
SSH1P38353 YHR045WYHR045W 1683 nt4.69□□□□□ -1.66
SSH1P38353 YOR1YGR281W 4434 nt4.69□□□□□ -1.66
SSH1P38353 MOT2YER068W 1764 nt4.68□□□□□ -1.66
SSH1P38353 YCR097W-AYCR097W-A 267 nt4.68□□□□□ -1.66
SSH1P38353 RPS16BYDL083C 432 nt4.68□□□□□ -1.66
SSH1P38353 ZRT1YGL255W 1131 nt4.68□□□□□ -1.66
SSH1P38353 YGR022CYGR022C 330 nt4.68□□□□□ -1.66
SSH1P38353 MTW1YAL034W-A 870 nt4.68□□□□□ -1.66
SSH1P38353 SEN34YAR008W 828 nt4.68□□□□□ -1.66
SSH1P38353 MRPL22YNL177C 930 nt4.68□□□□□ -1.66
SSH1P38353 LEM3YNL323W 1245 nt4.68□□□□□ -1.66
SSH1P38353 MRPL36YBR122C 534 nt4.68□□□□□ -1.66
SSH1P38353 NRD1YNL251C 1728 nt4.68□□□□□ -1.66
SSH1P38353 YGR125WYGR125W 3111 nt4.68□□□□□ -1.66
SSH1P38353 SAP155YFR040W 3009 nt4.67□□□□□ -1.66
SSH1P38353 RAD16YBR114W 2373 nt4.67□□□□□ -1.66
SSH1P38353 CAD1YDR423C 1230 nt4.67□□□□□ -1.66
SSH1P38353 RPA49YNL248C 1248 nt4.67□□□□□ -1.66
SSH1P38353 SSY5YJL156C 2100 nt4.67□□□□□ -1.66
SSH1P38353 ULA1YPL003W 1389 nt4.66□□□□□ -1.66
SSH1P38353 IES1YFL013C 2079 nt4.66□□□□□ -1.66
SSH1P38353 NUP116YMR047C 3342 nt4.66□□□□□ -1.66
SSH1P38353 KIP2YPL155C 2121 nt4.66□□□□□ -1.66
SSH1P38353 KRS1YDR037W 1776 nt4.66□□□□□ -1.66
SSH1P38353 ABF1YKL112W 2196 nt4.66□□□□□ -1.66
SSH1P38353 YGR016WYGR016W 573 nt4.66□□□□□ -1.66
SSH1P38353 COS9YKL219W 1224 nt4.66□□□□□ -1.66
SSH1P38353 YML131WYML131W 1098 nt4.66□□□□□ -1.66
SSH1P38353 YNR075C-AYNR075C-A 93 nt4.66□□□□□ -1.66
SSH1P38353 BUB3YOR026W 1026 nt4.66□□□□□ -1.66
SSH1P38353 FRE1YLR214W 2061 nt4.66□□□□□ -1.66
SSH1P38353 MSE1YOL033W 1611 nt4.65□□□□□ -1.66
SSH1P38353 TOS4YLR183C 1470 nt4.65□□□□□ -1.66
SSH1P38353 YDL119CYDL119C 924 nt4.65□□□□□ -1.67
SSH1P38353 RML2YEL050C 1182 nt4.65□□□□□ -1.67
SSH1P38353 CSR1YLR380W 1227 nt4.65□□□□□ -1.67
SSH1P38353 ATG17YLR423C 1254 nt4.65□□□□□ -1.67
SSH1P38353 YOL097W-AYOL097W-A 186 nt4.65□□□□□ -1.67
SSH1P38353 YOR024WYOR024W 324 nt4.65□□□□□ -1.67
SSH1P38353 DAK1YML070W 1755 nt4.64□□□□□ -1.67
SSH1P38353 MRP17YKL003C 396 nt4.64□□□□□ -1.67
SSH1P38353 SCO1YBR037C 888 nt4.64□□□□□ -1.67
SSH1P38353 YBR230W-AYBR230W-A 201 nt4.64□□□□□ -1.67
SSH1P38353 NOP7YGR103W 1818 nt4.63□□□□□ -1.67
SSH1P38353 PCA1YBR295W 3651 nt4.63□□□□□ -1.67
SSH1P38353 SCW4YGR279C 1161 nt4.63□□□□□ -1.67
SSH1P38353 JJJ3YJR097W 519 nt4.63□□□□□ -1.67
SSH1P38353 DAL82YNL314W 768 nt4.63□□□□□ -1.67
SSH1P38353 ROX3YBL093C 663 nt4.63□□□□□ -1.67
SSH1P38353 NPL6YMR091C 1308 nt4.63□□□□□ -1.67
SSH1P38353 RTT106YNL206C 1368 nt4.63□□□□□ -1.67
SSH1P38353 YTA12YMR089C 2478 nt4.62□□□□□ -1.67
SSH1P38353 LUC7YDL087C 786 nt4.62□□□□□ -1.67
SSH1P38353 GIR2YDR152W 798 nt4.62□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 20.4 ms