Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 SKG1YKR100C 1068 nt5.39□□□□□ -1.55
TY2A-LR1P0C2J4 SNO4YMR322C 714 nt5.39□□□□□ -1.55
TY2A-LR1P0C2J4 YOL131WYOL131W 327 nt5.39□□□□□ -1.55
TY2A-LR1P0C2J4 YOR200WYOR200W 399 nt5.39□□□□□ -1.55
TY2A-LR1P0C2J4 HSP33YOR391C 714 nt5.39□□□□□ -1.55
TY2A-LR1P0C2J4 YBR056C-BYBR056C-B 159 nt5.39□□□□□ -1.55
TY2A-LR1P0C2J4 HSP32YPL280W 714 nt5.39□□□□□ -1.55
TY2A-LR1P0C2J4 CLB2YPR119W 1476 nt5.39□□□□□ -1.55
TY2A-LR1P0C2J4 GUA1YMR217W 1578 nt5.38□□□□□ -1.55
TY2A-LR1P0C2J4 EGD2YHR193C 525 nt5.38□□□□□ -1.55
TY2A-LR1P0C2J4 UIP3YAR027W 708 nt5.38□□□□□ -1.55
TY2A-LR1P0C2J4 YMR086C-AYMR086C-A 339 nt5.38□□□□□ -1.55
TY2A-LR1P0C2J4 YOL050CYOL050C 321 nt5.38□□□□□ -1.55
TY2A-LR1P0C2J4 MAL13YGR288W 1422 nt5.38□□□□□ -1.55
TY2A-LR1P0C2J4 FKH1YIL131C 1455 nt5.38□□□□□ -1.55
TY2A-LR1P0C2J4 MTC5YDR128W 3447 nt5.37□□□□□ -1.55
TY2A-LR1P0C2J4 YDR396WYDR396W 501 nt5.37□□□□□ -1.55
TY2A-LR1P0C2J4 RPL12AYEL054C 498 nt5.37□□□□□ -1.55
TY2A-LR1P0C2J4 YIL086CYIL086C 309 nt5.37□□□□□ -1.55
TY2A-LR1P0C2J4 BMT5YIL096C 1011 nt5.37□□□□□ -1.55
TY2A-LR1P0C2J4 NDJ1YOL104C 1059 nt5.37□□□□□ -1.55
TY2A-LR1P0C2J4 RAD17YOR368W 1206 nt5.37□□□□□ -1.55
TY2A-LR1P0C2J4 SDA1YGR245C 2304 nt5.37□□□□□ -1.55
TY2A-LR1P0C2J4 CCZ1YBR131W 2115 nt5.36□□□□□ -1.55
TY2A-LR1P0C2J4 MCM21YDR318W 1107 nt5.36□□□□□ -1.55
TY2A-LR1P0C2J4 SUA5YGL169W 1281 nt5.36□□□□□ -1.55
TY2A-LR1P0C2J4 PAF1YBR279W 1338 nt5.36□□□□□ -1.55
TY2A-LR1P0C2J4 CLB1YGR108W 1416 nt5.36□□□□□ -1.55
TY2A-LR1P0C2J4 SHM1YBR263W 1473 nt5.36□□□□□ -1.55
TY2A-LR1P0C2J4 YFL042CYFL042C 2025 nt5.36□□□□□ -1.55
TY2A-LR1P0C2J4 MPP10YJR002W 1782 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 IXR1YKL032C 1794 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 OMS1YDR316W 1416 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 RSM10YDR041W 612 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 XPT1YJR133W 630 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 HCR1YLR192C 798 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 POS5YPL188W 1245 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 MRPL36YBR122C 534 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 PPR1YLR014C 2715 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 KEX2YNL238W 2445 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 TKL1YPR074C 2043 nt5.35□□□□□ -1.55
TY2A-LR1P0C2J4 GCR2YNL199C 1605 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 HSF1YGL073W 2502 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 CHO1YER026C 831 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 YKL107WYKL107W 930 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 YLR317WYLR317W 435 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 PSH1YOL054W 1221 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 RBD2YPL246C 789 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 ISA2YPR067W 558 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 MRI1YPR118W 1236 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 CKS1YBR135W 453 nt5.34□□□□□ -1.55
TY2A-LR1P0C2J4 CLA4YNL298W 2529 nt5.34□□□□□ -1.56
TY2A-LR1P0C2J4 LDB19YOR322C 2457 nt5.34□□□□□ -1.56
TY2A-LR1P0C2J4 HXT7YDR342C 1713 nt5.34□□□□□ -1.56
TY2A-LR1P0C2J4 HXT6YDR343C 1713 nt5.34□□□□□ -1.56
TY2A-LR1P0C2J4 ALT2YDR111C 1524 nt5.33□□□□□ -1.56
TY2A-LR1P0C2J4 QDR3YBR043C 2070 nt5.33□□□□□ -1.56
TY2A-LR1P0C2J4 GEX1YCL073C 1848 nt5.33□□□□□ -1.56
TY2A-LR1P0C2J4 RPS15YOL040C 429 nt5.33□□□□□ -1.56
TY2A-LR1P0C2J4 GIP1YBR045C 1920 nt5.33□□□□□ -1.56
TY2A-LR1P0C2J4 HIR1YBL008W 2523 nt5.32□□□□□ -1.56
TY2A-LR1P0C2J4 YDR154CYDR154C 351 nt5.32□□□□□ -1.56
TY2A-LR1P0C2J4 MOB2YFL034C-B 864 nt5.32□□□□□ -1.56
TY2A-LR1P0C2J4 YGR022CYGR022C 330 nt5.32□□□□□ -1.56
TY2A-LR1P0C2J4 CBP4YGR174C 513 nt5.32□□□□□ -1.56
TY2A-LR1P0C2J4 MRPL22YNL177C 930 nt5.32□□□□□ -1.56
TY2A-LR1P0C2J4 BZZ1YHR114W 1902 nt5.32□□□□□ -1.56
TY2A-LR1P0C2J4 TFG1YGR186W 2208 nt5.32□□□□□ -1.56
TY2A-LR1P0C2J4 SMP1YBR182C 1359 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 YDL119CYDL119C 924 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 YDL144CYDL144C 1071 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 CAD1YDR423C 1230 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 PDE1YGL248W 1110 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 YHR214WYHR214W 612 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 YLR124WYLR124W 345 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 YAR066WYAR066W 612 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 PFA3YNL326C 1011 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 YNR075C-AYNR075C-A 93 nt5.31□□□□□ -1.56
TY2A-LR1P0C2J4 BUL1YMR275C 2931 nt5.3□□□□□ -1.56
TY2A-LR1P0C2J4 MTF2YDL044C 1323 nt5.3□□□□□ -1.56
TY2A-LR1P0C2J4 YJR124CYJR124C 1347 nt5.3□□□□□ -1.56
TY2A-LR1P0C2J4 HOF1YMR032W 2010 nt5.3□□□□□ -1.56
TY2A-LR1P0C2J4 ERG26YGL001C 1050 nt5.3□□□□□ -1.56
TY2A-LR1P0C2J4 YGR273CYGR273C 525 nt5.3□□□□□ -1.56
TY2A-LR1P0C2J4 LST8YNL006W 912 nt5.3□□□□□ -1.56
TY2A-LR1P0C2J4 GYP1YOR070C 1914 nt5.3□□□□□ -1.56
TY2A-LR1P0C2J4 TEF1YPR080W 1377 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 TEF2YBR118W 1377 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 UBP7YIL156W 3216 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 CBP1YJL209W 1965 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 CDC19YAL038W 1503 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 MPC1YGL080W 393 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 SYF2YGR129W 648 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 GRE3YHR104W 984 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 SSP120YLR250W 705 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 YMR306C-AYMR306C-A 390 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 YPL073CYPL073C 486 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 YIL067CYIL067C 2037 nt5.29□□□□□ -1.56
TY2A-LR1P0C2J4 STL1YDR536W 1710 nt5.28□□□□□ -1.56
TY2A-LR1P0C2J4 TRK2YKR050W 2670 nt5.28□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms