Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.12■■■□□ 2.41
PDZRN3Q9UPQ7 TSPY9P-201ENST00000440215 945 ntBASIC30.12■■■□□ 2.41
PDZRN3Q9UPQ7 TSPY11P-201ENST00000442607 1045 ntBASIC30.12■■■□□ 2.41
PDZRN3Q9UPQ7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDZRN3Q9UPQ7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDZRN3Q9UPQ7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PDZRN3Q9UPQ7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.11■■■□□ 2.41
PDZRN3Q9UPQ7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.11■■■□□ 2.41
PDZRN3Q9UPQ7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PDZRN3Q9UPQ7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PDZRN3Q9UPQ7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.1■■■□□ 2.41
PDZRN3Q9UPQ7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PDZRN3Q9UPQ7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PDZRN3Q9UPQ7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.09■■■□□ 2.41
PDZRN3Q9UPQ7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PDZRN3Q9UPQ7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.09■■■□□ 2.41
PDZRN3Q9UPQ7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PDZRN3Q9UPQ7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 AC131281.2-201ENST00000520478 145 ntBASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.08■■■□□ 2.41
PDZRN3Q9UPQ7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.07■■■□□ 2.41
PDZRN3Q9UPQ7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PDZRN3Q9UPQ7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PDZRN3Q9UPQ7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
PDZRN3Q9UPQ7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.06■■■□□ 2.4
PDZRN3Q9UPQ7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PDZRN3Q9UPQ7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.05■■■□□ 2.4
PDZRN3Q9UPQ7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
PDZRN3Q9UPQ7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PDZRN3Q9UPQ7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.04■■■□□ 2.4
PDZRN3Q9UPQ7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PDZRN3Q9UPQ7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PDZRN3Q9UPQ7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PDZRN3Q9UPQ7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.04■■■□□ 2.4
PDZRN3Q9UPQ7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.04■■■□□ 2.4
PDZRN3Q9UPQ7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PDZRN3Q9UPQ7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.03■■■□□ 2.4
PDZRN3Q9UPQ7 AC093323.1-202ENST00000635031 2045 ntBASIC30.03■■■□□ 2.4
PDZRN3Q9UPQ7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
PDZRN3Q9UPQ7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PDZRN3Q9UPQ7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PDZRN3Q9UPQ7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
PDZRN3Q9UPQ7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
PDZRN3Q9UPQ7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
PDZRN3Q9UPQ7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
PDZRN3Q9UPQ7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.02■■■□□ 2.4
PDZRN3Q9UPQ7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.02■■■□□ 2.4
PDZRN3Q9UPQ7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
PDZRN3Q9UPQ7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.01■■■□□ 2.39
PDZRN3Q9UPQ7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PDZRN3Q9UPQ7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.01■■■□□ 2.39
PDZRN3Q9UPQ7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PDZRN3Q9UPQ7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PDZRN3Q9UPQ7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PDZRN3Q9UPQ7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PDZRN3Q9UPQ7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PDZRN3Q9UPQ7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.01■■■□□ 2.39
PDZRN3Q9UPQ7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30■■■□□ 2.39
PDZRN3Q9UPQ7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30■■■□□ 2.39
PDZRN3Q9UPQ7 AC022211.4-201ENST00000625094 2161 ntBASIC30■■■□□ 2.39
PDZRN3Q9UPQ7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30■■■□□ 2.39
PDZRN3Q9UPQ7 AL136116.3-201ENST00000402907 1138 ntBASIC30■■■□□ 2.39
PDZRN3Q9UPQ7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30■■■□□ 2.39
PDZRN3Q9UPQ7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30■■■□□ 2.39
PDZRN3Q9UPQ7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
PDZRN3Q9UPQ7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.99■■■□□ 2.39
PDZRN3Q9UPQ7 AC142381.3-201ENST00000568208 1670 ntBASIC29.99■■■□□ 2.39
PDZRN3Q9UPQ7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
PDZRN3Q9UPQ7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.99■■■□□ 2.39
PDZRN3Q9UPQ7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.99■■■□□ 2.39
PDZRN3Q9UPQ7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.99■■■□□ 2.39
PDZRN3Q9UPQ7 MIR3621-201ENST00000580529 85 ntBASIC29.99■■■□□ 2.39
PDZRN3Q9UPQ7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
PDZRN3Q9UPQ7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PDZRN3Q9UPQ7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PDZRN3Q9UPQ7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PDZRN3Q9UPQ7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.98■■■□□ 2.39
PDZRN3Q9UPQ7 AC138932.3-201ENST00000567634 1902 ntBASIC29.98■■■□□ 2.39
PDZRN3Q9UPQ7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
PDZRN3Q9UPQ7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PDZRN3Q9UPQ7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms