Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YBL070CYBL070C 321 nt6.89□□□□□ -1.31
MSH3P25336 YOL166CYOL166C 339 nt6.89□□□□□ -1.31
MSH3P25336 SGF29YCL010C 780 nt6.89□□□□□ -1.31
MSH3P25336 YML133CYML133C 4125 nt6.89□□□□□ -1.31
MSH3P25336 HIS7YBR248C 1659 nt6.88□□□□□ -1.31
MSH3P25336 COX9YDL067C 180 nt6.88□□□□□ -1.31
MSH3P25336 MRPL1YDR116C 858 nt6.88□□□□□ -1.31
MSH3P25336 YBL029C-AYBL029C-A 285 nt6.88□□□□□ -1.31
MSH3P25336 MRPS12YNR036C 462 nt6.88□□□□□ -1.31
MSH3P25336 SCT1YBL011W 2280 nt6.88□□□□□ -1.31
MSH3P25336 MRC1YCL061C 3291 nt6.87□□□□□ -1.31
MSH3P25336 BUG1YDL099W 1026 nt6.87□□□□□ -1.31
MSH3P25336 YDR034W-BYDR034W-B 156 nt6.87□□□□□ -1.31
MSH3P25336 ADK2YER170W 678 nt6.87□□□□□ -1.31
MSH3P25336 TMT1YER175C 900 nt6.87□□□□□ -1.31
MSH3P25336 ARD1YHR013C 717 nt6.87□□□□□ -1.31
MSH3P25336 YIR042CYIR042C 711 nt6.87□□□□□ -1.31
MSH3P25336 HYM1YKL189W 1200 nt6.87□□□□□ -1.31
MSH3P25336 RPF2YKR081C 1035 nt6.87□□□□□ -1.31
MSH3P25336 PSR2YLR019W 1194 nt6.87□□□□□ -1.31
MSH3P25336 FPR3YML074C 1236 nt6.87□□□□□ -1.31
MSH3P25336 YNL134CYNL134C 1131 nt6.87□□□□□ -1.31
MSH3P25336 YBR027CYBR027C 333 nt6.87□□□□□ -1.31
MSH3P25336 YBR124WYBR124W 360 nt6.87□□□□□ -1.31
MSH3P25336 RPL21AYBR191W 483 nt6.87□□□□□ -1.31
MSH3P25336 PYK2YOR347C 1521 nt6.86□□□□□ -1.31
MSH3P25336 ABD1YBR236C 1311 nt6.86□□□□□ -1.31
MSH3P25336 PCL2YDL127W 927 nt6.86□□□□□ -1.31
MSH3P25336 CTR2YHR175W 570 nt6.86□□□□□ -1.31
MSH3P25336 POP5YAL033W 522 nt6.86□□□□□ -1.31
MSH3P25336 YPR160C-AYPR160C-A 285 nt6.86□□□□□ -1.31
MSH3P25336 HRQ1YDR291W 3234 nt6.86□□□□□ -1.31
MSH3P25336 HSP104YLL026W 2727 nt6.85□□□□□ -1.31
MSH3P25336 UIP5YKR044W 1332 nt6.85□□□□□ -1.31
MSH3P25336 HMLALPHA1YCL066W 528 nt6.85□□□□□ -1.31
MSH3P25336 MATALPHA1YCR040W 528 nt6.85□□□□□ -1.31
MSH3P25336 GPI11YDR302W 660 nt6.85□□□□□ -1.31
MSH3P25336 HSP31YDR533C 714 nt6.85□□□□□ -1.31
MSH3P25336 YDR541CYDR541C 1035 nt6.85□□□□□ -1.31
MSH3P25336 DCD1YHR144C 939 nt6.85□□□□□ -1.31
MSH3P25336 YJU2YKL095W 837 nt6.85□□□□□ -1.31
MSH3P25336 YLR366WYLR366W 306 nt6.85□□□□□ -1.31
MSH3P25336 SEC65YML105C 822 nt6.85□□□□□ -1.31
MSH3P25336 YMC1YPR058W 924 nt6.85□□□□□ -1.31
MSH3P25336 CKS1YBR135W 453 nt6.85□□□□□ -1.31
MSH3P25336 YFR006WYFR006W 1608 nt6.85□□□□□ -1.31
MSH3P25336 IVY1YDR229W 1362 nt6.84□□□□□ -1.31
MSH3P25336 ATF1YOR377W 1578 nt6.84□□□□□ -1.31
MSH3P25336 YGL188CYGL188C 174 nt6.84□□□□□ -1.31
MSH3P25336 PPE1YHR075C 1203 nt6.84□□□□□ -1.31
MSH3P25336 MRPL4YLR439W 960 nt6.84□□□□□ -1.31
MSH3P25336 EFM2YBR271W 1260 nt6.84□□□□□ -1.31
MSH3P25336 TEL2YGR099W 2067 nt6.84□□□□□ -1.31
MSH3P25336 CRZ1YNL027W 2037 nt6.84□□□□□ -1.31
MSH3P25336 MCH1YDL054C 1461 nt6.84□□□□□ -1.31
MSH3P25336 Q0255Q0255 1419 nt6.84□□□□□ -1.32
MSH3P25336 VPS72YDR485C 2388 nt6.83□□□□□ -1.32
MSH3P25336 RMD1YDL001W 1293 nt6.83□□□□□ -1.32
MSH3P25336 RPC53YDL150W 1269 nt6.83□□□□□ -1.32
MSH3P25336 CUP2YGL166W 678 nt6.83□□□□□ -1.32
MSH3P25336 SPG1YGR236C 288 nt6.83□□□□□ -1.32
MSH3P25336 SUI2YJR007W 915 nt6.83□□□□□ -1.32
MSH3P25336 SPO20YMR017W 1194 nt6.83□□□□□ -1.32
MSH3P25336 RPN8YOR261C 1017 nt6.83□□□□□ -1.32
MSH3P25336 YOL036WYOL036W 2286 nt6.83□□□□□ -1.32
MSH3P25336 AIM17YHL021C 1398 nt6.82□□□□□ -1.32
MSH3P25336 YPK3YBR028C 1578 nt6.82□□□□□ -1.32
MSH3P25336 YJR124CYJR124C 1347 nt6.82□□□□□ -1.32
MSH3P25336 PTK2YJR059W 2457 nt6.82□□□□□ -1.32
MSH3P25336 NSE5YML023C 1671 nt6.82□□□□□ -1.32
MSH3P25336 PIB1YDR313C 861 nt6.82□□□□□ -1.32
MSH3P25336 GEP7YGL057C 864 nt6.82□□□□□ -1.32
MSH3P25336 YGR168CYGR168C 1131 nt6.82□□□□□ -1.32
MSH3P25336 YHR070C-AYHR070C-A 411 nt6.82□□□□□ -1.32
MSH3P25336 YHR112CYHR112C 1137 nt6.82□□□□□ -1.32
MSH3P25336 AIM23YJL131C 1071 nt6.82□□□□□ -1.32
MSH3P25336 RHO4YKR055W 876 nt6.82□□□□□ -1.32
MSH3P25336 RPS3YNL178W 723 nt6.82□□□□□ -1.32
MSH3P25336 RRS1YOR294W 612 nt6.82□□□□□ -1.32
MSH3P25336 YPR109WYPR109W 885 nt6.82□□□□□ -1.32
MSH3P25336 PRY3YJL078C 2646 nt6.82□□□□□ -1.32
MSH3P25336 YTP1YNL237W 1380 nt6.82□□□□□ -1.32
MSH3P25336 VPS70YJR126C 2436 nt6.81□□□□□ -1.32
MSH3P25336 ZWF1YNL241C 1518 nt6.81□□□□□ -1.32
MSH3P25336 EXG1YLR300W 1347 nt6.81□□□□□ -1.32
MSH3P25336 RAD59YDL059C 717 nt6.81□□□□□ -1.32
MSH3P25336 YKL169CYKL169C 384 nt6.81□□□□□ -1.32
MSH3P25336 PCD1YLR151C 1023 nt6.81□□□□□ -1.32
MSH3P25336 AMA1YGR225W 1782 nt6.81□□□□□ -1.32
MSH3P25336 PRP9YDL030W 1593 nt6.81□□□□□ -1.32
MSH3P25336 PRP24YMR268C 1335 nt6.8□□□□□ -1.32
MSH3P25336 YDL121CYDL121C 450 nt6.8□□□□□ -1.32
MSH3P25336 YDR187CYDR187C 519 nt6.8□□□□□ -1.32
MSH3P25336 BUD26YDR241W 288 nt6.8□□□□□ -1.32
MSH3P25336 YFL042CYFL042C 2025 nt6.8□□□□□ -1.32
MSH3P25336 IRC7YFR055W 1023 nt6.8□□□□□ -1.32
MSH3P25336 YHR218W-AYHR218W-A 318 nt6.8□□□□□ -1.32
MSH3P25336 YJL215CYJL215C 360 nt6.8□□□□□ -1.32
MSH3P25336 SPC34YKR037C 888 nt6.8□□□□□ -1.32
MSH3P25336 YLR361C-AYLR361C-A 297 nt6.8□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 11.9 ms