Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 CLB2YPR119W 1476 nt6.7□□□□□ -1.34
VPS4P52917 VBA1YMR088C 1689 nt6.7□□□□□ -1.34
VPS4P52917 YJR015WYJR015W 1533 nt6.7□□□□□ -1.34
VPS4P52917 PGM1YKL127W 1713 nt6.7□□□□□ -1.34
VPS4P52917 NOB1YOR056C 1380 nt6.69□□□□□ -1.34
VPS4P52917 GDA1YEL042W 1557 nt6.69□□□□□ -1.34
VPS4P52917 TIM54YJL054W 1437 nt6.69□□□□□ -1.34
VPS4P52917 DMA1YHR115C 1251 nt6.69□□□□□ -1.34
VPS4P52917 NPA3YJR072C 1158 nt6.69□□□□□ -1.34
VPS4P52917 YLR296WYLR296W 327 nt6.69□□□□□ -1.34
VPS4P52917 ROG3YFR022W 2202 nt6.69□□□□□ -1.34
VPS4P52917 GPT2YKR067W 2232 nt6.69□□□□□ -1.34
VPS4P52917 ATF1YOR377W 1578 nt6.69□□□□□ -1.34
VPS4P52917 APE3YBR286W 1614 nt6.68□□□□□ -1.34
VPS4P52917 YEA6YEL006W 1008 nt6.68□□□□□ -1.34
VPS4P52917 YIR042CYIR042C 711 nt6.68□□□□□ -1.34
VPS4P52917 ICT1YLR099C 1185 nt6.68□□□□□ -1.34
VPS4P52917 YBR230W-AYBR230W-A 201 nt6.68□□□□□ -1.34
VPS4P52917 YDR109CYDR109C 2148 nt6.68□□□□□ -1.34
VPS4P52917 YFL042CYFL042C 2025 nt6.67□□□□□ -1.34
VPS4P52917 KKQ8YKL168C 2175 nt6.67□□□□□ -1.34
VPS4P52917 COA1YIL157C 594 nt6.67□□□□□ -1.34
VPS4P52917 PFK2YMR205C 2880 nt6.66□□□□□ -1.34
VPS4P52917 SUP19tS(UGA)E 82 nt6.66□□□□□ -1.34
VPS4P52917 SUP17tS(UGA)I 82 nt6.66□□□□□ -1.34
VPS4P52917 SUP16tS(UGA)P 82 nt6.66□□□□□ -1.34
VPS4P52917 BSC4YNL269W 396 nt6.66□□□□□ -1.34
VPS4P52917 EMW1YNL313C 2715 nt6.66□□□□□ -1.34
VPS4P52917 MAL11YGR289C 1851 nt6.66□□□□□ -1.34
VPS4P52917 VPS5YOR069W 2028 nt6.66□□□□□ -1.34
VPS4P52917 YKL151CYKL151C 1014 nt6.65□□□□□ -1.34
VPS4P52917 CRP1YHR146W 1398 nt6.65□□□□□ -1.35
VPS4P52917 RTT106YNL206C 1368 nt6.65□□□□□ -1.35
VPS4P52917 GLE1YDL207W 1617 nt6.65□□□□□ -1.35
VPS4P52917 YGL235WYGL235W 537 nt6.64□□□□□ -1.35
VPS4P52917 ECM3YOR092W 1842 nt6.64□□□□□ -1.35
VPS4P52917 VPS1YKR001C 2115 nt6.64□□□□□ -1.35
VPS4P52917 AMD1YML035C 2433 nt6.64□□□□□ -1.35
VPS4P52917 SFB3YHR098C 2790 nt6.63□□□□□ -1.35
VPS4P52917 RPT6YGL048C 1218 nt6.63□□□□□ -1.35
VPS4P52917 YJR115WYJR115W 510 nt6.63□□□□□ -1.35
VPS4P52917 ODC2YOR222W 924 nt6.63□□□□□ -1.35
VPS4P52917 GUP2YPL189W 1830 nt6.62□□□□□ -1.35
VPS4P52917 YCR097W-AYCR097W-A 267 nt6.62□□□□□ -1.35
VPS4P52917 MHR1YDR296W 681 nt6.62□□□□□ -1.35
VPS4P52917 CWC21YDR482C 408 nt6.62□□□□□ -1.35
VPS4P52917 YHR145CYHR145C 357 nt6.62□□□□□ -1.35
VPS4P52917 ERG7YHR072W 2196 nt6.62□□□□□ -1.35
VPS4P52917 NDC1YML031W 1968 nt6.61□□□□□ -1.35
VPS4P52917 SKI2YLR398C 3864 nt6.61□□□□□ -1.35
VPS4P52917 YDR278CYDR278C 318 nt6.61□□□□□ -1.35
VPS4P52917 YFR052C-AYFR052C-A 306 nt6.61□□□□□ -1.35
VPS4P52917 MOD5YOR274W 1287 nt6.61□□□□□ -1.35
VPS4P52917 TNA1YGR260W 1605 nt6.61□□□□□ -1.35
VPS4P52917 VRP1YLR337C 2454 nt6.6□□□□□ -1.35
VPS4P52917 PRO3YER023W 861 nt6.6□□□□□ -1.35
VPS4P52917 APS3YJL024C 585 nt6.6□□□□□ -1.35
VPS4P52917 SSK22YCR073C 3996 nt6.6□□□□□ -1.35
VPS4P52917 GIT1YCR098C 1557 nt6.6□□□□□ -1.35
VPS4P52917 VPS61YDR136C 573 nt6.59□□□□□ -1.35
VPS4P52917 SLO1YER180C-A 258 nt6.59□□□□□ -1.35
VPS4P52917 HSX1tR(CCU)J 72 nt6.59□□□□□ -1.35
VPS4P52917 DJP1YIR004W 1299 nt6.59□□□□□ -1.35
VPS4P52917 YJL171CYJL171C 1191 nt6.59□□□□□ -1.35
VPS4P52917 YOR318CYOR318C 306 nt6.59□□□□□ -1.35
VPS4P52917 PDR18YNR070W 4002 nt6.59□□□□□ -1.35
VPS4P52917 ASN1YPR145W 1719 nt6.59□□□□□ -1.36
VPS4P52917 PRP46YPL151C 1356 nt6.58□□□□□ -1.36
VPS4P52917 SOG2YOR353C 2376 nt6.58□□□□□ -1.36
VPS4P52917 YKL223WYKL223W 333 nt6.58□□□□□ -1.36
VPS4P52917 ATP14YLR295C 375 nt6.58□□□□□ -1.36
VPS4P52917 ATG23YLR431C 1362 nt6.57□□□□□ -1.36
VPS4P52917 IRS4YKR019C 1848 nt6.57□□□□□ -1.36
VPS4P52917 FRS2YFL022C 1512 nt6.57□□□□□ -1.36
VPS4P52917 YDR401WYDR401W 564 nt6.57□□□□□ -1.36
VPS4P52917 YEL053W-AYEL053W-A 348 nt6.57□□□□□ -1.36
VPS4P52917 TFS1YLR178C 660 nt6.57□□□□□ -1.36
VPS4P52917 YNL296WYNL296W 315 nt6.57□□□□□ -1.36
VPS4P52917 SAM4YPL273W 978 nt6.57□□□□□ -1.36
VPS4P52917 MCM3YEL032W 2916 nt6.57□□□□□ -1.36
VPS4P52917 TAX4YJL083W 1815 nt6.57□□□□□ -1.36
VPS4P52917 ENP1YBR247C 1452 nt6.56□□□□□ -1.36
VPS4P52917 CAD1YDR423C 1230 nt6.56□□□□□ -1.36
VPS4P52917 SLD7YOR060C 774 nt6.56□□□□□ -1.36
VPS4P52917 ATP4YPL078C 735 nt6.56□□□□□ -1.36
VPS4P52917 SET5YHR207C 1581 nt6.56□□□□□ -1.36
VPS4P52917 NUD1YOR373W 2556 nt6.56□□□□□ -1.36
VPS4P52917 COT1YOR316C 1320 nt6.55□□□□□ -1.36
VPS4P52917 MMP1YLL061W 1752 nt6.55□□□□□ -1.36
VPS4P52917 YGL036WYGL036W 2730 nt6.55□□□□□ -1.36
VPS4P52917 RPT3YDR394W 1287 nt6.55□□□□□ -1.36
VPS4P52917 UTR4YEL038W 684 nt6.55□□□□□ -1.36
VPS4P52917 tN(GUU)CtN(GUU)C 74 nt6.55□□□□□ -1.36
VPS4P52917 tN(GUU)FtN(GUU)F 74 nt6.55□□□□□ -1.36
VPS4P52917 tN(GUU)GtN(GUU)G 74 nt6.55□□□□□ -1.36
VPS4P52917 tN(GUU)KtN(GUU)K 74 nt6.55□□□□□ -1.36
VPS4P52917 tN(GUU)LtN(GUU)L 74 nt6.55□□□□□ -1.36
VPS4P52917 tN(GUU)N1tN(GUU)N1 74 nt6.55□□□□□ -1.36
VPS4P52917 tN(GUU)N2tN(GUU)N2 74 nt6.55□□□□□ -1.36
VPS4P52917 tN(GUU)O1tN(GUU)O1 74 nt6.55□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 60.2 ms