Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNA1P01562 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNA1P01562 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNA1P01562 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
IFNA1P01562 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.65■□□□□ 0.58
IFNA1P01562 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.64■□□□□ 0.58
IFNA1P01562 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
IFNA1P01562 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNA1P01562 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNA1P01562 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNA1P01562 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNA1P01562 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
IFNA1P01562 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNA1P01562 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNA1P01562 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNA1P01562 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.64■□□□□ 0.57
IFNA1P01562 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
IFNA1P01562 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
IFNA1P01562 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNA1P01562 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNA1P01562 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IFNA1P01562 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
IFNA1P01562 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
IFNA1P01562 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNA1P01562 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNA1P01562 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.62■□□□□ 0.57
IFNA1P01562 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNA1P01562 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.62■□□□□ 0.57
IFNA1P01562 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.62■□□□□ 0.57
IFNA1P01562 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFNA1P01562 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IFNA1P01562 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IFNA1P01562 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFNA1P01562 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFNA1P01562 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFNA1P01562 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNA1P01562 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFNA1P01562 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.61■□□□□ 0.57
IFNA1P01562 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNA1P01562 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFNA1P01562 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.61■□□□□ 0.57
IFNA1P01562 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFNA1P01562 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.6■□□□□ 0.57
IFNA1P01562 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNA1P01562 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFNA1P01562 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
IFNA1P01562 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.6■□□□□ 0.57
IFNA1P01562 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IFNA1P01562 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.6■□□□□ 0.57
IFNA1P01562 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.59■□□□□ 0.57
IFNA1P01562 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFNA1P01562 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
IFNA1P01562 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFNA1P01562 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFNA1P01562 AL117328.2-201ENST00000624617 1940 ntBASIC18.59■□□□□ 0.57
IFNA1P01562 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.59■□□□□ 0.57
IFNA1P01562 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFNA1P01562 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
IFNA1P01562 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFNA1P01562 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFNA1P01562 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IFNA1P01562 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
IFNA1P01562 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IFNA1P01562 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFNA1P01562 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.59■□□□□ 0.57
IFNA1P01562 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IFNA1P01562 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.58■□□□□ 0.57
IFNA1P01562 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IFNA1P01562 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.58■□□□□ 0.57
IFNA1P01562 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFNA1P01562 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.58■□□□□ 0.56
IFNA1P01562 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
IFNA1P01562 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
IFNA1P01562 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFNA1P01562 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFNA1P01562 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFNA1P01562 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFNA1P01562 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
IFNA1P01562 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFNA1P01562 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFNA1P01562 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IFNA1P01562 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFNA1P01562 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFNA1P01562 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFNA1P01562 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
IFNA1P01562 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
IFNA1P01562 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFNA1P01562 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IFNA1P01562 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.56■□□□□ 0.56
IFNA1P01562 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IFNA1P01562 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.56■□□□□ 0.56
IFNA1P01562 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.56■□□□□ 0.56
IFNA1P01562 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFNA1P01562 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFNA1P01562 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFNA1P01562 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.55■□□□□ 0.56
IFNA1P01562 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFNA1P01562 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
IFNA1P01562 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFNA1P01562 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms