Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC14.38□□□□□ -0.11
KRTAP3-3Q9BYR6 AP003168.1-201ENST00000530091 307 ntBASIC14.38□□□□□ -0.11
KRTAP3-3Q9BYR6 AC087888.1-201ENST00000550884 1254 ntBASIC14.38□□□□□ -0.11
KRTAP3-3Q9BYR6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC14.38□□□□□ -0.11
KRTAP3-3Q9BYR6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC14.38□□□□□ -0.11
KRTAP3-3Q9BYR6 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KRTAP3-3Q9BYR6 AL023806.2-201ENST00000603042 263 ntBASIC14.38□□□□□ -0.11
KRTAP3-3Q9BYR6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
KRTAP3-3Q9BYR6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 AC008549.2-201ENST00000333482 706 ntBASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 AC068587.2-201ENST00000478386 781 ntBASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 AC108729.1-201ENST00000487812 947 ntBASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 AC091057.2-201ENST00000602594 792 ntBASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
KRTAP3-3Q9BYR6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 AC006511.2-201ENST00000388966 660 ntBASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 AC022028.1-201ENST00000412054 408 ntBASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 ATP5C1P1-201ENST00000441945 895 ntBASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 AP001010.1-201ENST00000588397 538 ntTSL 5 BASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 AC078899.4-201ENST00000593952 1113 ntBASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 AC007423.1-201ENST00000605009 627 ntBASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 AC016727.1-205ENST00000605437 569 ntBASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC14.36□□□□□ -0.11
KRTAP3-3Q9BYR6 CBWD3-206ENST00000478048 1736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 AC010486.3-201ENST00000511602 785 ntBASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 AC013731.1-201ENST00000604340 883 ntBASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 AL034374.2-201ENST00000605281 548 ntBASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRTAP3-3Q9BYR6 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC14.34□□□□□ -0.11
KRTAP3-3Q9BYR6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC14.34□□□□□ -0.11
KRTAP3-3Q9BYR6 MTND1P22-201ENST00000510572 951 ntBASIC14.34□□□□□ -0.11
KRTAP3-3Q9BYR6 AC110760.3-202ENST00000515177 371 ntBASIC14.34□□□□□ -0.11
KRTAP3-3Q9BYR6 AC091515.1-201ENST00000548110 679 ntBASIC14.34□□□□□ -0.11
KRTAP3-3Q9BYR6 AC004816.1-202ENST00000557691 629 ntTSL 2 BASIC14.34□□□□□ -0.11
KRTAP3-3Q9BYR6 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRTAP3-3Q9BYR6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRTAP3-3Q9BYR6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KRTAP3-3Q9BYR6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC14.33□□□□□ -0.12
KRTAP3-3Q9BYR6 MTND1P1-201ENST00000445453 368 ntBASIC14.33□□□□□ -0.12
KRTAP3-3Q9BYR6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC14.33□□□□□ -0.12
KRTAP3-3Q9BYR6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC14.33□□□□□ -0.12
KRTAP3-3Q9BYR6 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC14.33□□□□□ -0.12
KRTAP3-3Q9BYR6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
KRTAP3-3Q9BYR6 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 RPSAP41-201ENST00000439695 860 ntBASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 TRIM36-IT1-201ENST00000503723 881 ntBASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 LINC00564-201ENST00000567258 1119 ntBASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 AC025175.1-201ENST00000606482 759 ntBASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 AC133528.1-201ENST00000608316 805 ntBASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 AL162574.2-201ENST00000614618 657 ntBASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 AP003072.5-201ENST00000623872 773 ntBASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC14.32□□□□□ -0.12
KRTAP3-3Q9BYR6 LIF-AS1-201ENST00000447565 808 ntTSL 3 BASIC14.31□□□□□ -0.12
KRTAP3-3Q9BYR6 MTND3P4-201ENST00000453537 303 ntBASIC14.31□□□□□ -0.12
KRTAP3-3Q9BYR6 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
KRTAP3-3Q9BYR6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC14.31□□□□□ -0.12
KRTAP3-3Q9BYR6 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.31□□□□□ -0.12
KRTAP3-3Q9BYR6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC14.31□□□□□ -0.12
KRTAP3-3Q9BYR6 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRTAP3-3Q9BYR6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 AC010460.2-201ENST00000509054 677 ntBASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 AP003071.4-201ENST00000562276 1284 ntBASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 OR10AE1P-201ENST00000606962 1029 ntBASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRTAP3-3Q9BYR6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRTAP3-3Q9BYR6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.29□□□□□ -0.12
KRTAP3-3Q9BYR6 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRTAP3-3Q9BYR6 OR13Z1P-201ENST00000416141 834 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms