Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 YRF1-7YPL283C 5580 nt8.65□□□□□ -1.02
TY2B-LR1P0C2J3 FAA4YMR246W 2085 nt8.65□□□□□ -1.03
TY2B-LR1P0C2J3 YNL190WYNL190W 615 nt8.64□□□□□ -1.03
TY2B-LR1P0C2J3 ECM38YLR299W 1983 nt8.64□□□□□ -1.03
TY2B-LR1P0C2J3 RPS2YGL123W 765 nt8.63□□□□□ -1.03
TY2B-LR1P0C2J3 GAL2YLR081W 1725 nt8.63□□□□□ -1.03
TY2B-LR1P0C2J3 PPR1YLR014C 2715 nt8.63□□□□□ -1.03
TY2B-LR1P0C2J3 FHN1YGR131W 525 nt8.63□□□□□ -1.03
TY2B-LR1P0C2J3 JAC1YGL018C 555 nt8.62□□□□□ -1.03
TY2B-LR1P0C2J3 MGR2YPL098C 342 nt8.62□□□□□ -1.03
TY2B-LR1P0C2J3 ARO2YGL148W 1131 nt8.61□□□□□ -1.03
TY2B-LR1P0C2J3 MNN5YJL186W 1761 nt8.61□□□□□ -1.03
TY2B-LR1P0C2J3 GCD11YER025W 1584 nt8.61□□□□□ -1.03
TY2B-LR1P0C2J3 GAT1YFL021W 1533 nt8.61□□□□□ -1.03
TY2B-LR1P0C2J3 SUA5YGL169W 1281 nt8.61□□□□□ -1.03
TY2B-LR1P0C2J3 RPT1YKL145W 1404 nt8.6□□□□□ -1.03
TY2B-LR1P0C2J3 YNR048WYNR048W 1182 nt8.6□□□□□ -1.03
TY2B-LR1P0C2J3 TEF1YPR080W 1377 nt8.59□□□□□ -1.03
TY2B-LR1P0C2J3 TEF2YBR118W 1377 nt8.59□□□□□ -1.03
TY2B-LR1P0C2J3 YPK2YMR104C 2034 nt8.59□□□□□ -1.03
TY2B-LR1P0C2J3 VNX1YNL321W 2727 nt8.59□□□□□ -1.03
TY2B-LR1P0C2J3 TDA6YPR157W 1404 nt8.59□□□□□ -1.03
TY2B-LR1P0C2J3 ERC1YHR032W 1746 nt8.59□□□□□ -1.04
TY2B-LR1P0C2J3 BGL2YGR282C 942 nt8.58□□□□□ -1.04
TY2B-LR1P0C2J3 YOL163WYOL163W 510 nt8.58□□□□□ -1.04
TY2B-LR1P0C2J3 OST3YOR085W 1053 nt8.58□□□□□ -1.04
TY2B-LR1P0C2J3 HAP2YGL237C 798 nt8.58□□□□□ -1.04
TY2B-LR1P0C2J3 VPS1YKR001C 2115 nt8.58□□□□□ -1.04
TY2B-LR1P0C2J3 RRN10YBL025W 438 nt8.58□□□□□ -1.04
TY2B-LR1P0C2J3 PRE7YBL041W 726 nt8.58□□□□□ -1.04
TY2B-LR1P0C2J3 TRK2YKR050W 2670 nt8.58□□□□□ -1.04
TY2B-LR1P0C2J3 YHR045WYHR045W 1683 nt8.57□□□□□ -1.04
TY2B-LR1P0C2J3 RAD3YER171W 2337 nt8.57□□□□□ -1.04
TY2B-LR1P0C2J3 STM1YLR150W 822 nt8.57□□□□□ -1.04
TY2B-LR1P0C2J3 RPB4YJL140W 666 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 IFA38YBR159W 1044 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 RQC1YDR333C 2172 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 ICE2YIL090W 1476 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 SUP2tY(GUA)D 75 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 SUP11tY(GUA)F1 75 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 SUP6tY(GUA)F2 75 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 SUP7tY(GUA)J1 75 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 SUP4tY(GUA)J2 75 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 SUP5tY(GUA)M1 75 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 SUP8tY(GUA)M2 75 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 SUP3tY(GUA)O 75 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 YJL068CYJL068C 900 nt8.56□□□□□ -1.04
TY2B-LR1P0C2J3 COX18YGR062C 951 nt8.54□□□□□ -1.04
TY2B-LR1P0C2J3 FEX1YOR390W 1128 nt8.54□□□□□ -1.04
TY2B-LR1P0C2J3 FEX2YPL279C 1128 nt8.54□□□□□ -1.04
TY2B-LR1P0C2J3 UGO1YDR470C 1509 nt8.53□□□□□ -1.04
TY2B-LR1P0C2J3 DTR1YBR180W 1719 nt8.53□□□□□ -1.04
TY2B-LR1P0C2J3 ALT1YLR089C 1779 nt8.53□□□□□ -1.04
TY2B-LR1P0C2J3 EMP46YLR080W 1335 nt8.52□□□□□ -1.05
TY2B-LR1P0C2J3 PAD1YDR538W 729 nt8.52□□□□□ -1.05
TY2B-LR1P0C2J3 PGK1YCR012W 1251 nt8.51□□□□□ -1.05
TY2B-LR1P0C2J3 RME1YGR044C 903 nt8.51□□□□□ -1.05
TY2B-LR1P0C2J3 BUL1YMR275C 2931 nt8.51□□□□□ -1.05
TY2B-LR1P0C2J3 NOP8YOL144W 1455 nt8.51□□□□□ -1.05
TY2B-LR1P0C2J3 PPS1YBR276C 2424 nt8.51□□□□□ -1.05
TY2B-LR1P0C2J3 CAM1YPL048W 1248 nt8.5□□□□□ -1.05
TY2B-LR1P0C2J3 YJR012CYJR012C 624 nt8.5□□□□□ -1.05
TY2B-LR1P0C2J3 RBD2YPL246C 789 nt8.5□□□□□ -1.05
TY2B-LR1P0C2J3 IES1YFL013C 2079 nt8.5□□□□□ -1.05
TY2B-LR1P0C2J3 NUP116YMR047C 3342 nt8.49□□□□□ -1.05
TY2B-LR1P0C2J3 YJL171CYJL171C 1191 nt8.49□□□□□ -1.05
TY2B-LR1P0C2J3 POM33YLL023C 840 nt8.49□□□□□ -1.05
TY2B-LR1P0C2J3 MLF3YNL074C 1359 nt8.49□□□□□ -1.05
TY2B-LR1P0C2J3 CIR2YOR356W 1896 nt8.48□□□□□ -1.05
TY2B-LR1P0C2J3 HSP78YDR258C 2436 nt8.48□□□□□ -1.05
TY2B-LR1P0C2J3 PRP45YAL032C 1140 nt8.48□□□□□ -1.05
TY2B-LR1P0C2J3 TOS4YLR183C 1470 nt8.47□□□□□ -1.05
TY2B-LR1P0C2J3 YDR134CYDR134C 411 nt8.47□□□□□ -1.05
TY2B-LR1P0C2J3 YER148W-AYER148W-A 579 nt8.47□□□□□ -1.05
TY2B-LR1P0C2J3 DED81YHR019C 1665 nt8.46□□□□□ -1.05
TY2B-LR1P0C2J3 FET3YMR058W 1911 nt8.46□□□□□ -1.05
TY2B-LR1P0C2J3 KSS1YGR040W 1107 nt8.46□□□□□ -1.05
TY2B-LR1P0C2J3 ILV2YMR108W 2064 nt8.46□□□□□ -1.06
TY2B-LR1P0C2J3 CTF8YHR191C 402 nt8.45□□□□□ -1.06
TY2B-LR1P0C2J3 ROX3YBL093C 663 nt8.45□□□□□ -1.06
TY2B-LR1P0C2J3 RPL3YOR063W 1164 nt8.45□□□□□ -1.06
TY2B-LR1P0C2J3 ARP3YJR065C 1350 nt8.45□□□□□ -1.06
TY2B-LR1P0C2J3 TAX4YJL083W 1815 nt8.44□□□□□ -1.06
TY2B-LR1P0C2J3 ATO2YNR002C 849 nt8.44□□□□□ -1.06
TY2B-LR1P0C2J3 YIL177CYIL177C 5277 nt8.44□□□□□ -1.06
TY2B-LR1P0C2J3 GPI11YDR302W 660 nt8.43□□□□□ -1.06
TY2B-LR1P0C2J3 IPK1YDR315C 846 nt8.43□□□□□ -1.06
TY2B-LR1P0C2J3 YPR195CYPR195C 330 nt8.43□□□□□ -1.06
TY2B-LR1P0C2J3 MSH1YHR120W 2880 nt8.43□□□□□ -1.06
TY2B-LR1P0C2J3 RPN6YDL097C 1305 nt8.43□□□□□ -1.06
TY2B-LR1P0C2J3 VPS70YJR126C 2436 nt8.42□□□□□ -1.06
TY2B-LR1P0C2J3 COQ6YGR255C 1440 nt8.42□□□□□ -1.06
TY2B-LR1P0C2J3 TUB2YFL037W 1374 nt8.42□□□□□ -1.06
TY2B-LR1P0C2J3 CAB4YGR277C 918 nt8.42□□□□□ -1.06
TY2B-LR1P0C2J3 SKN1YGR143W 2316 nt8.41□□□□□ -1.06
TY2B-LR1P0C2J3 DFG5YMR238W 1377 nt8.41□□□□□ -1.06
TY2B-LR1P0C2J3 YER186CYER186C 921 nt8.41□□□□□ -1.06
TY2B-LR1P0C2J3 ARA2YMR041C 1008 nt8.41□□□□□ -1.06
TY2B-LR1P0C2J3 YMR105W-AYMR105W-A 195 nt8.4□□□□□ -1.06
TY2B-LR1P0C2J3 TOM5YPR133W-A 153 nt8.4□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 70.2 ms