Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 EFM3YJR129C 1020 nt8.5□□□□□ -1.05
TY1B-HO13535 DUS4YLR405W 1104 nt8.5□□□□□ -1.05
TY1B-HO13535 PPR1YLR014C 2715 nt8.5□□□□□ -1.05
TY1B-HO13535 RPS2YGL123W 765 nt8.5□□□□□ -1.05
TY1B-HO13535 MGR2YPL098C 342 nt8.5□□□□□ -1.05
TY1B-HO13535 YRF1-3YGR296W 5580 nt8.49□□□□□ -1.05
TY1B-HO13535 YRF1-6YNL339C 5580 nt8.49□□□□□ -1.05
TY1B-HO13535 YRF1-7YPL283C 5580 nt8.49□□□□□ -1.05
TY1B-HO13535 OST3YOR085W 1053 nt8.48□□□□□ -1.05
TY1B-HO13535 ECM38YLR299W 1983 nt8.48□□□□□ -1.05
TY1B-HO13535 YNL190WYNL190W 615 nt8.48□□□□□ -1.05
TY1B-HO13535 TEF1YPR080W 1377 nt8.47□□□□□ -1.05
TY1B-HO13535 TEF2YBR118W 1377 nt8.47□□□□□ -1.05
TY1B-HO13535 MNN5YJL186W 1761 nt8.47□□□□□ -1.05
TY1B-HO13535 GAT1YFL021W 1533 nt8.47□□□□□ -1.05
TY1B-HO13535 GCD11YER025W 1584 nt8.47□□□□□ -1.05
TY1B-HO13535 VNX1YNL321W 2727 nt8.47□□□□□ -1.05
TY1B-HO13535 GAL2YLR081W 1725 nt8.46□□□□□ -1.05
TY1B-HO13535 SUA5YGL169W 1281 nt8.46□□□□□ -1.05
TY1B-HO13535 PRE7YBL041W 726 nt8.46□□□□□ -1.05
TY1B-HO13535 YNR048WYNR048W 1182 nt8.46□□□□□ -1.05
TY1B-HO13535 VPS1YKR001C 2115 nt8.46□□□□□ -1.06
TY1B-HO13535 RPT1YKL145W 1404 nt8.46□□□□□ -1.06
TY1B-HO13535 TDA6YPR157W 1404 nt8.46□□□□□ -1.06
TY1B-HO13535 YOL163WYOL163W 510 nt8.45□□□□□ -1.06
TY1B-HO13535 YPK2YMR104C 2034 nt8.45□□□□□ -1.06
TY1B-HO13535 YHR045WYHR045W 1683 nt8.45□□□□□ -1.06
TY1B-HO13535 COX18YGR062C 951 nt8.45□□□□□ -1.06
TY1B-HO13535 BGL2YGR282C 942 nt8.45□□□□□ -1.06
TY1B-HO13535 IFA38YBR159W 1044 nt8.45□□□□□ -1.06
TY1B-HO13535 TRK2YKR050W 2670 nt8.45□□□□□ -1.06
TY1B-HO13535 ERC1YHR032W 1746 nt8.44□□□□□ -1.06
TY1B-HO13535 HAP2YGL237C 798 nt8.44□□□□□ -1.06
TY1B-HO13535 RPB4YJL140W 666 nt8.44□□□□□ -1.06
TY1B-HO13535 RRN10YBL025W 438 nt8.44□□□□□ -1.06
TY1B-HO13535 PAD1YDR538W 729 nt8.43□□□□□ -1.06
TY1B-HO13535 RAD3YER171W 2337 nt8.43□□□□□ -1.06
TY1B-HO13535 ICE2YIL090W 1476 nt8.43□□□□□ -1.06
TY1B-HO13535 SUP2tY(GUA)D 75 nt8.43□□□□□ -1.06
TY1B-HO13535 SUP11tY(GUA)F1 75 nt8.43□□□□□ -1.06
TY1B-HO13535 SUP6tY(GUA)F2 75 nt8.43□□□□□ -1.06
TY1B-HO13535 SUP7tY(GUA)J1 75 nt8.43□□□□□ -1.06
TY1B-HO13535 SUP4tY(GUA)J2 75 nt8.43□□□□□ -1.06
TY1B-HO13535 SUP5tY(GUA)M1 75 nt8.43□□□□□ -1.06
TY1B-HO13535 SUP8tY(GUA)M2 75 nt8.43□□□□□ -1.06
TY1B-HO13535 SUP3tY(GUA)O 75 nt8.43□□□□□ -1.06
TY1B-HO13535 STM1YLR150W 822 nt8.43□□□□□ -1.06
TY1B-HO13535 YJL068CYJL068C 900 nt8.42□□□□□ -1.06
TY1B-HO13535 NUP116YMR047C 3342 nt8.41□□□□□ -1.06
TY1B-HO13535 EMP46YLR080W 1335 nt8.41□□□□□ -1.06
TY1B-HO13535 FEX1YOR390W 1128 nt8.41□□□□□ -1.06
TY1B-HO13535 FEX2YPL279C 1128 nt8.41□□□□□ -1.06
TY1B-HO13535 ALT1YLR089C 1779 nt8.41□□□□□ -1.06
TY1B-HO13535 RQC1YDR333C 2172 nt8.4□□□□□ -1.06
TY1B-HO13535 UGO1YDR470C 1509 nt8.4□□□□□ -1.07
TY1B-HO13535 YJR012CYJR012C 624 nt8.38□□□□□ -1.07
TY1B-HO13535 CAM1YPL048W 1248 nt8.38□□□□□ -1.07
TY1B-HO13535 NOP8YOL144W 1455 nt8.38□□□□□ -1.07
TY1B-HO13535 MLF3YNL074C 1359 nt8.38□□□□□ -1.07
TY1B-HO13535 POM33YLL023C 840 nt8.38□□□□□ -1.07
TY1B-HO13535 PGK1YCR012W 1251 nt8.37□□□□□ -1.07
TY1B-HO13535 RME1YGR044C 903 nt8.37□□□□□ -1.07
TY1B-HO13535 BUL1YMR275C 2931 nt8.37□□□□□ -1.07
TY1B-HO13535 IES1YFL013C 2079 nt8.36□□□□□ -1.07
TY1B-HO13535 YJL171CYJL171C 1191 nt8.36□□□□□ -1.07
TY1B-HO13535 HSP78YDR258C 2436 nt8.35□□□□□ -1.07
TY1B-HO13535 RPL3YOR063W 1164 nt8.35□□□□□ -1.07
TY1B-HO13535 IPK1YDR315C 846 nt8.35□□□□□ -1.07
TY1B-HO13535 PRP45YAL032C 1140 nt8.35□□□□□ -1.07
TY1B-HO13535 RBD2YPL246C 789 nt8.35□□□□□ -1.07
TY1B-HO13535 FET3YMR058W 1911 nt8.34□□□□□ -1.07
TY1B-HO13535 YER148W-AYER148W-A 579 nt8.34□□□□□ -1.07
TY1B-HO13535 PPS1YBR276C 2424 nt8.34□□□□□ -1.07
TY1B-HO13535 CIR2YOR356W 1896 nt8.34□□□□□ -1.07
TY1B-HO13535 VPS70YJR126C 2436 nt8.34□□□□□ -1.08
TY1B-HO13535 DED81YHR019C 1665 nt8.33□□□□□ -1.08
TY1B-HO13535 TOS4YLR183C 1470 nt8.33□□□□□ -1.08
TY1B-HO13535 KSS1YGR040W 1107 nt8.33□□□□□ -1.08
TY1B-HO13535 ROX3YBL093C 663 nt8.33□□□□□ -1.08
TY1B-HO13535 DTR1YBR180W 1719 nt8.33□□□□□ -1.08
TY1B-HO13535 YDR134CYDR134C 411 nt8.33□□□□□ -1.08
TY1B-HO13535 RPN6YDL097C 1305 nt8.32□□□□□ -1.08
TY1B-HO13535 CTF8YHR191C 402 nt8.32□□□□□ -1.08
TY1B-HO13535 YPR195CYPR195C 330 nt8.32□□□□□ -1.08
TY1B-HO13535 TUB2YFL037W 1374 nt8.31□□□□□ -1.08
TY1B-HO13535 ARP3YJR065C 1350 nt8.31□□□□□ -1.08
TY1B-HO13535 MSH1YHR120W 2880 nt8.31□□□□□ -1.08
TY1B-HO13535 TAX4YJL083W 1815 nt8.31□□□□□ -1.08
TY1B-HO13535 YIL177CYIL177C 5277 nt8.3□□□□□ -1.08
TY1B-HO13535 COQ6YGR255C 1440 nt8.3□□□□□ -1.08
TY1B-HO13535 GPI11YDR302W 660 nt8.3□□□□□ -1.08
TY1B-HO13535 CAB4YGR277C 918 nt8.3□□□□□ -1.08
TY1B-HO13535 YMR105W-AYMR105W-A 195 nt8.3□□□□□ -1.08
TY1B-HO13535 TOM5YPR133W-A 153 nt8.3□□□□□ -1.08
TY1B-HO13535 YER186CYER186C 921 nt8.29□□□□□ -1.08
TY1B-HO13535 Q0182Q0182 405 nt8.28□□□□□ -1.08
TY1B-HO13535 ILV2YMR108W 2064 nt8.28□□□□□ -1.08
TY1B-HO13535 SKN1YGR143W 2316 nt8.28□□□□□ -1.08
TY1B-HO13535 DFG5YMR238W 1377 nt8.28□□□□□ -1.08
TY1B-HO13535 ARA2YMR041C 1008 nt8.27□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 22.1 ms