Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV3S1A0A5B6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.29■■□□□ 1.16
TCRBV3S1A0A5B6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV3S1A0A5B6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV3S1A0A5B6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
TCRBV3S1A0A5B6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV3S1A0A5B6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TCRBV3S1A0A5B6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV3S1A0A5B6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV3S1A0A5B6 CLDN5-201ENST00000403084 2357 ntBASIC22.27■■□□□ 1.16
TCRBV3S1A0A5B6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV3S1A0A5B6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.26■■□□□ 1.15
TCRBV3S1A0A5B6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV3S1A0A5B6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.26■■□□□ 1.15
TCRBV3S1A0A5B6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
TCRBV3S1A0A5B6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV3S1A0A5B6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV3S1A0A5B6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV3S1A0A5B6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
TCRBV3S1A0A5B6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV3S1A0A5B6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.24■■□□□ 1.15
TCRBV3S1A0A5B6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV3S1A0A5B6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV3S1A0A5B6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV3S1A0A5B6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV3S1A0A5B6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV3S1A0A5B6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TCRBV3S1A0A5B6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.24■■□□□ 1.15
TCRBV3S1A0A5B6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV3S1A0A5B6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 AC087741.3-201ENST00000624270 1347 ntBASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 ABCB10P4-201ENST00000566803 2184 ntBASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV3S1A0A5B6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.21■■□□□ 1.15
TCRBV3S1A0A5B6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
TCRBV3S1A0A5B6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.2■■□□□ 1.15
TCRBV3S1A0A5B6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV3S1A0A5B6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV3S1A0A5B6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
TCRBV3S1A0A5B6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV3S1A0A5B6 C9orf163-202ENST00000624034 2573 ntBASIC22.2■■□□□ 1.14
TCRBV3S1A0A5B6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV3S1A0A5B6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TCRBV3S1A0A5B6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV3S1A0A5B6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 MIR219A2-201ENST00000608502 1504 ntBASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV3S1A0A5B6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.18■■□□□ 1.14
TCRBV3S1A0A5B6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.18■■□□□ 1.14
TCRBV3S1A0A5B6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV3S1A0A5B6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV3S1A0A5B6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TCRBV3S1A0A5B6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV3S1A0A5B6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV3S1A0A5B6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TCRBV3S1A0A5B6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.17■■□□□ 1.14
TCRBV3S1A0A5B6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms