Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 ARG81YML099C 2643 nt7.23□□□□□ -1.25
MSH3P25336 EDE1YBL047C 4146 nt7.23□□□□□ -1.25
MSH3P25336 COX15YER141W 1461 nt7.23□□□□□ -1.25
MSH3P25336 RMD9YGL107C 1941 nt7.23□□□□□ -1.25
MSH3P25336 SRG1SRG1 551 nt7.22□□□□□ -1.25
MSH3P25336 YDR161WYDR161W 1164 nt7.22□□□□□ -1.25
MSH3P25336 SUF5tG(CCC)O 72 nt7.22□□□□□ -1.25
MSH3P25336 YER138W-AYER138W-A 105 nt7.22□□□□□ -1.25
MSH3P25336 DID2YKR035W-A 615 nt7.22□□□□□ -1.25
MSH3P25336 YBL107W-AYBL107W-A 105 nt7.22□□□□□ -1.25
MSH3P25336 BAG7YOR134W 1230 nt7.22□□□□□ -1.25
MSH3P25336 RGT2YDL138W 2292 nt7.22□□□□□ -1.25
MSH3P25336 MSS116YDR194C 1995 nt7.22□□□□□ -1.25
MSH3P25336 PHM8YER037W 966 nt7.21□□□□□ -1.26
MSH3P25336 FBA1YKL060C 1080 nt7.21□□□□□ -1.26
MSH3P25336 COX5AYNL052W 462 nt7.21□□□□□ -1.26
MSH3P25336 RFC4YOL094C 972 nt7.21□□□□□ -1.26
MSH3P25336 COX10YPL172C 1389 nt7.2□□□□□ -1.26
MSH3P25336 SKI2YLR398C 3864 nt7.2□□□□□ -1.26
MSH3P25336 YLR285C-AYLR285C-A 171 nt7.2□□□□□ -1.26
MSH3P25336 MRPL23YOR150W 492 nt7.2□□□□□ -1.26
MSH3P25336 YHL045WYHL045W 348 nt7.19□□□□□ -1.26
MSH3P25336 RRT7YLL030C 342 nt7.19□□□□□ -1.26
MSH3P25336 YNL228WYNL228W 777 nt7.19□□□□□ -1.26
MSH3P25336 YOL050CYOL050C 321 nt7.19□□□□□ -1.26
MSH3P25336 YOR020W-AYOR020W-A 273 nt7.19□□□□□ -1.26
MSH3P25336 RBS1YDL189W 1374 nt7.19□□□□□ -1.26
MSH3P25336 THI2YBR240C 1353 nt7.19□□□□□ -1.26
MSH3P25336 PMT2YAL023C 2280 nt7.18□□□□□ -1.26
MSH3P25336 ATG32YIL146C 1590 nt7.18□□□□□ -1.26
MSH3P25336 HAT2YEL056W 1206 nt7.18□□□□□ -1.26
MSH3P25336 CIS3YJL158C 684 nt7.18□□□□□ -1.26
MSH3P25336 YNL092WYNL092W 1203 nt7.18□□□□□ -1.26
MSH3P25336 YNL120CYNL120C 486 nt7.18□□□□□ -1.26
MSH3P25336 HAL1YPR005C 885 nt7.18□□□□□ -1.26
MSH3P25336 snR189snR189 189 nt7.18□□□□□ -1.26
MSH3P25336 TFC6YDR362C 2019 nt7.18□□□□□ -1.26
MSH3P25336 SES1YDR023W 1389 nt7.18□□□□□ -1.26
MSH3P25336 GUS1YGL245W 2127 nt7.18□□□□□ -1.26
MSH3P25336 ALT2YDR111C 1524 nt7.17□□□□□ -1.26
MSH3P25336 RCK1YGL158W 1539 nt7.17□□□□□ -1.26
MSH3P25336 MGR3YMR115W 1506 nt7.17□□□□□ -1.26
MSH3P25336 MSP1YGR028W 1089 nt7.17□□□□□ -1.26
MSH3P25336 AAD14YNL331C 1131 nt7.17□□□□□ -1.26
MSH3P25336 YPL250W-AYPL250W-A 288 nt7.17□□□□□ -1.26
MSH3P25336 TFB4YPR056W 1017 nt7.17□□□□□ -1.26
MSH3P25336 NFI1YOR156C 2181 nt7.17□□□□□ -1.26
MSH3P25336 SMF3YLR034C 1422 nt7.17□□□□□ -1.26
MSH3P25336 BIO3YNR058W 1443 nt7.17□□□□□ -1.26
MSH3P25336 YEF1YEL041W 1488 nt7.17□□□□□ -1.26
MSH3P25336 MSY1YPL097W 1479 nt7.17□□□□□ -1.26
MSH3P25336 MPH3YJR160C 1809 nt7.16□□□□□ -1.26
MSH3P25336 AAD6YFL056C 639 nt7.16□□□□□ -1.26
MSH3P25336 ADH4YGL256W 1149 nt7.16□□□□□ -1.26
MSH3P25336 HGH1YGR187C 1185 nt7.16□□□□□ -1.26
MSH3P25336 SQT1YIR012W 1296 nt7.16□□□□□ -1.26
MSH3P25336 YJR146WYJR146W 354 nt7.16□□□□□ -1.26
MSH3P25336 YNL303WYNL303W 348 nt7.16□□□□□ -1.26
MSH3P25336 DCP1YOL149W 696 nt7.16□□□□□ -1.26
MSH3P25336 FMP40YPL222W 2067 nt7.16□□□□□ -1.26
MSH3P25336 ESC8YOL017W 2145 nt7.16□□□□□ -1.26
MSH3P25336 CRH1YGR189C 1524 nt7.16□□□□□ -1.26
MSH3P25336 RRP17YDR412W 708 nt7.15□□□□□ -1.26
MSH3P25336 BUD16YEL029C 939 nt7.15□□□□□ -1.26
MSH3P25336 TCA17YEL048C 459 nt7.15□□□□□ -1.26
MSH3P25336 YLL017WYLL017W 312 nt7.15□□□□□ -1.26
MSH3P25336 PEX13YLR191W 1161 nt7.15□□□□□ -1.26
MSH3P25336 YLR312CYLR312C 1197 nt7.15□□□□□ -1.26
MSH3P25336 LDB7YBL006C 543 nt7.15□□□□□ -1.26
MSH3P25336 PRM4YPL156C 855 nt7.15□□□□□ -1.26
MSH3P25336 DAP1YPL170W 459 nt7.15□□□□□ -1.26
MSH3P25336 SPE3YPR069C 882 nt7.15□□□□□ -1.26
MSH3P25336 KAR1YNL188W 1302 nt7.15□□□□□ -1.26
MSH3P25336 UTR2YEL040W 1404 nt7.15□□□□□ -1.27
MSH3P25336 MIF2YKL089W 1650 nt7.15□□□□□ -1.27
MSH3P25336 PAT1YCR077C 2391 nt7.14□□□□□ -1.27
MSH3P25336 RPP1YHR062C 882 nt7.14□□□□□ -1.27
MSH3P25336 YIL086CYIL086C 309 nt7.14□□□□□ -1.27
MSH3P25336 OPT1YJL212C 2400 nt7.14□□□□□ -1.27
MSH3P25336 HOC1YJR075W 1191 nt7.14□□□□□ -1.27
MSH3P25336 CCP1YKR066C 1086 nt7.14□□□□□ -1.27
MSH3P25336 ODC2YOR222W 924 nt7.14□□□□□ -1.27
MSH3P25336 PRP46YPL151C 1356 nt7.14□□□□□ -1.27
MSH3P25336 YPL257WYPL257W 582 nt7.14□□□□□ -1.27
MSH3P25336 BPL1YDL141W 2073 nt7.13□□□□□ -1.27
MSH3P25336 IMA5YJL216C 1746 nt7.13□□□□□ -1.27
MSH3P25336 DHH1YDL160C 1521 nt7.13□□□□□ -1.27
MSH3P25336 ATG18YFR021W 1503 nt7.13□□□□□ -1.27
MSH3P25336 YGL101WYGL101W 648 nt7.13□□□□□ -1.27
MSH3P25336 MRP13YGR084C 1020 nt7.13□□□□□ -1.27
MSH3P25336 KSH1YNL024C-A 219 nt7.13□□□□□ -1.27
MSH3P25336 TAH18YPR048W 1872 nt7.13□□□□□ -1.27
MSH3P25336 LDB19YOR322C 2457 nt7.12□□□□□ -1.27
MSH3P25336 YHK8YHR048W 1545 nt7.12□□□□□ -1.27
MSH3P25336 YGR011WYGR011W 327 nt7.12□□□□□ -1.27
MSH3P25336 YKL102CYKL102C 306 nt7.12□□□□□ -1.27
MSH3P25336 YLR123CYLR123C 330 nt7.12□□□□□ -1.27
MSH3P25336 CDA2YLR308W 939 nt7.12□□□□□ -1.27
MSH3P25336 NCE103YNL036W 666 nt7.12□□□□□ -1.27
MSH3P25336 YIP3YNL044W 531 nt7.12□□□□□ -1.27
Retrieved 100 of 7,029 protein–RNA pairs in 41.4 ms